Parental gene: | Lims1, ENSRNOG00000037765 |
| Aliases: | Lims1, Pinch1, RGD1560732 |
| Description: | LIM and senescent cell antigen-like-containing domain protein 1 [Source:RefSeq peptide;Acc:NP_001138928] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 20:29774110..29824244(+) |
>ENSRNOG00000037765
ATGACCGCACTACAGCTTAAGGAGCTTTCACAGTCGGGCCTCTACCGGAGAAGGCGAGAGCGTCCTGATAGTCTGAGAGT
CAATGGGCTCCCAGAGGAAGAGCTGAGCAACATGGCCAATGCTTTGGCCAGTGCCACGTGTGAACGCTGCAAGGGGGGCT
TTGACCCTGCTGAGAAGATCGTGAACAGTAATGGTGAGCTGTACCATGAACAGTGTTTCGTGTGTGCTCAGTGCTTCCAG
CAGTTCCCAGAAGGACTCTTTTATGAGTTTGAAGGAAGAAAGTACTGTGAGCATGATTTCCAGATGCTCTTTGCTCCCTG
CTGCCACCAGTGTGGTGAATTCATCATTGGCAGGGTTATCAAAGCCATGAACAACAGCTGGCATCCTGAGTGCTTCAGAT
GTGACCTCTGCCAGGAAGTGCTGGCAGACATAGGGTTTGTCAAGAATGCTGGCAGACACCTGTGTCGCCCATGTCATAAT
CGTGAAAAGGCCAGAGGCCTTGGAAAATACATCTGCCAGAAATGCCATGCCATCATTGATGAACAGCCTTTGATTTTCAA
GAACGACCCTTACCACCCAGACCACTTCAACTGTGCCAACTGCGGGAAGGAGCTAACTGCTGATGCTCGGGAGCTGAAAG
GGGAGCTATACTGTCTGCCATGTCATGATAAGATGGGGGTCCCTATCTGTGGCGCCTGCCGGAGGCCCATTGAAGGGCGA
GTAGTGAATGCCATGGGCAAGCAATGGCATGTGGAGCATTTTGTTTGTGCCAAATGTGAAAAACCATTTCTTGGACATCG
CCATTATGAGAGGAAGGGCTTGGCCTATTGTGAGACTCACTATAATCAGCTATTTGGTGATGTTTGTTTCCATTGCAACC
GTGTCATAGAAGGTGACGTGGTCTCTGCCCTCAACAAGGCCTGGTGTGTGAGCTGCTTTGCCTGTTCCACTTGCAATACC
AAACTAACACTCAAGAATAAATTTGTGGAGTTTGACATGAAACCAGTCTGTAAGAAGTGCTACGAGAAATTTCCTTTGGA
GCTGAAGAAAAGACTTAAGAAACTATCTGAGACCTTAGGAAGGAAATAA
ATGACCGCACTACAGCTTAAGGAGCTTTCACAGTCGGGCCTCTACCGGAGAAGGCGAGAGCGTCCTGATAGTCTGAGAGT
CAATGGGCTCCCAGAGGAAGAGCTGAGCAACATGGCCAATGCTTTGGCCAGTGCCACGTGTGAACGCTGCAAGGGGGGCT
TTGACCCTGCTGAGAAGATCGTGAACAGTAATGGTGAGCTGTACCATGAACAGTGTTTCGTGTGTGCTCAGTGCTTCCAG
CAGTTCCCAGAAGGACTCTTTTATGAGTTTGAAGGAAGAAAGTACTGTGAGCATGATTTCCAGATGCTCTTTGCTCCCTG
CTGCCACCAGTGTGGTGAATTCATCATTGGCAGGGTTATCAAAGCCATGAACAACAGCTGGCATCCTGAGTGCTTCAGAT
GTGACCTCTGCCAGGAAGTGCTGGCAGACATAGGGTTTGTCAAGAATGCTGGCAGACACCTGTGTCGCCCATGTCATAAT
CGTGAAAAGGCCAGAGGCCTTGGAAAATACATCTGCCAGAAATGCCATGCCATCATTGATGAACAGCCTTTGATTTTCAA
GAACGACCCTTACCACCCAGACCACTTCAACTGTGCCAACTGCGGGAAGGAGCTAACTGCTGATGCTCGGGAGCTGAAAG
GGGAGCTATACTGTCTGCCATGTCATGATAAGATGGGGGTCCCTATCTGTGGCGCCTGCCGGAGGCCCATTGAAGGGCGA
GTAGTGAATGCCATGGGCAAGCAATGGCATGTGGAGCATTTTGTTTGTGCCAAATGTGAAAAACCATTTCTTGGACATCG
CCATTATGAGAGGAAGGGCTTGGCCTATTGTGAGACTCACTATAATCAGCTATTTGGTGATGTTTGTTTCCATTGCAACC
GTGTCATAGAAGGTGACGTGGTCTCTGCCCTCAACAAGGCCTGGTGTGTGAGCTGCTTTGCCTGTTCCACTTGCAATACC
AAACTAACACTCAAGAATAAATTTGTGGAGTTTGACATGAAACCAGTCTGTAAGAAGTGCTACGAGAAATTTCCTTTGGA
GCTGAAGAAAAGACTTAAGAAACTATCTGAGACCTTAGGAAGGAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 18 .36 RPM |
| SRP017611_kidney | 37 .05 RPM |
| SRP017611_brain | 25 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013902 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000004334 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001879 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000875 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_432 | 82.35 | 74.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000037765 retrocopies