Parental gene: | PAFAH1B1, ENSSARG00000002826 |
| Aliases: | None |
| Description: | platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) [Source:HGNC Symbol;Acc:8574] |
| Organism: | Shrew (Sorex araneus) |
| Coordinates: | scaffold_220286:40022..56800(+) |
>ENSSARG00000002826
AATCGAGCTATAGCAGATTATCTTCGTTCAAATGGCTATGAAGAGGCATATTCAGTTTTTAAAAAGGAAGCTGAATTAGA
TATGAATGAAGAATTAGATAAGAAGTATGCTTGTCTTTTGGAAAAAAAGTGCACATCTGTTATTAGATTACAAAAGAGGG
TTATGGAATTAGAATCAAAGCTAAATGAAGCGAAAGAAGAATTTACGTCAGGTGGACCTCTTGGTCAGAAACGAGATCCA
AAAGAATGGATTCCCCGTCCACCAGAAAAATACGCATTGAGTGGCCATAGGAGTCCAGTCACTCGAGTCATTTTCCATCC
TGTGTTCAGTGTTATGGTCTCTGCTTCAGAGGATGCTACAATTAAGGTGTGGGATTATGAGACTGGAGATTTTGAACGAA
CTCTTAAGGGGCATACAGACTCTGTACAGGATATTTCATTTGACCACAGCGGCAAACTTCTGGCTTCCTGTTCTGCAGAT
ATGACCATTAAACTCTGGGATTTTCAGGGCTTTGAATGCATCAGAACCATGCATGGCCATGATCATAATGTTTCTTCAGT
AGCCATCATGCCCAATGGAGATCATATAGTGTCTGCCTCAAGGGATAAAACTATAAAAATGTGGGAAGTACAGACTGGCT
ACTGTGTGAAGACATTCACAGGTCACAGAGAATGGGTACGTATGGTGCGACCAAATCAGGATGGCACTCTGATAGCCAGC
TGTTCCAATGACCAGACCGTGCGTGTGTGGGTTGTAGCAACAAAGGAATGCAAGGCTGAGCTTCGAGAACATGAGCATGT
GGTAGAGTGCATTTCCTGGGCTCCAGAAAGCTCATATTCTTCCATCTCTGAAGCAACAGGATCTGAGACTAAAAAAAGTG
GCAAACCTGGACCATTCTTACTGTCAGGATCCAGAGACAAGACTATTAAGATGTGGGATGTCAGTACTGGCATGTGCCTT
ATGACCCTTGTGGGTCATGATAACTGGGTACGTGGAGTTCTGTTCCATTCTGGGGGGAAATTTATTTTGAGTTGTGCTGA
TGACAAGACCCTGCGTGTATGGGATTACAAGAACAAGCGATGCATGAAGACCCTCAATGCGCATGAACACTTTGTTACCT
CCTTGGATTTCCATAAGACGGCCCCATATGTGGTTACTGGCAGTGTAGATCAAACAGTAAAGGTGTGGGAGTGCCGTTGA
AATCGAGCTATAGCAGATTATCTTCGTTCAAATGGCTATGAAGAGGCATATTCAGTTTTTAAAAAGGAAGCTGAATTAGA
TATGAATGAAGAATTAGATAAGAAGTATGCTTGTCTTTTGGAAAAAAAGTGCACATCTGTTATTAGATTACAAAAGAGGG
TTATGGAATTAGAATCAAAGCTAAATGAAGCGAAAGAAGAATTTACGTCAGGTGGACCTCTTGGTCAGAAACGAGATCCA
AAAGAATGGATTCCCCGTCCACCAGAAAAATACGCATTGAGTGGCCATAGGAGTCCAGTCACTCGAGTCATTTTCCATCC
TGTGTTCAGTGTTATGGTCTCTGCTTCAGAGGATGCTACAATTAAGGTGTGGGATTATGAGACTGGAGATTTTGAACGAA
CTCTTAAGGGGCATACAGACTCTGTACAGGATATTTCATTTGACCACAGCGGCAAACTTCTGGCTTCCTGTTCTGCAGAT
ATGACCATTAAACTCTGGGATTTTCAGGGCTTTGAATGCATCAGAACCATGCATGGCCATGATCATAATGTTTCTTCAGT
AGCCATCATGCCCAATGGAGATCATATAGTGTCTGCCTCAAGGGATAAAACTATAAAAATGTGGGAAGTACAGACTGGCT
ACTGTGTGAAGACATTCACAGGTCACAGAGAATGGGTACGTATGGTGCGACCAAATCAGGATGGCACTCTGATAGCCAGC
TGTTCCAATGACCAGACCGTGCGTGTGTGGGTTGTAGCAACAAAGGAATGCAAGGCTGAGCTTCGAGAACATGAGCATGT
GGTAGAGTGCATTTCCTGGGCTCCAGAAAGCTCATATTCTTCCATCTCTGAAGCAACAGGATCTGAGACTAAAAAAAGTG
GCAAACCTGGACCATTCTTACTGTCAGGATCCAGAGACAAGACTATTAAGATGTGGGATGTCAGTACTGGCATGTGCCTT
ATGACCCTTGTGGGTCATGATAACTGGGTACGTGGAGTTCTGTTCCATTCTGGGGGGAAATTTATTTTGAGTTGTGCTGA
TGACAAGACCCTGCGTGTATGGGATTACAAGAACAAGCGATGCATGAAGACCCTCAATGCGCATGAACACTTTGTTACCT
CCTTGGATTTCCATAAGACGGCCCCATATGTGGTTACTGGCAGTGTAGATCAAACAGTAAAGGTGTGGGAGTGCCGTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000007168 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000010776 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000020745 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007796 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008551 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sara_266 | 60.52 | 86.97 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sara_275 | 56.48 | 54.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_sara_364 | 53.29 | 71.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_sara_588 | 60.41 | 73.18 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSARG00000002826 retrocopies