Parental gene: | RPS4X, ENSSARG00000010806 |
| Aliases: | None |
| Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
| Organism: | Shrew (Sorex araneus) |
| Coordinates: | scaffold_154889:192..2668(+) |
>ENSSARG00000010806
GCTCCTCGTCCATCCACTGGCCCCCACAAACTGAGAGAGTGTCTTCCACTCATCATTTTCCTAAGGAACAGGCTTAAGTA
TGCTCTGACAGGAGACGAGGTGAAGAAGATCTGCATGCAGCGATTCATTAAGATTGATGGCAAGGTCCGAACTGATATAA
CCTACCCGGCAGGTTTTATGGATGTCATCAGTATTGATAAGACGGGAGAGAATTTCCGGCTGATCTATGACACCAAGGGA
CGCTTTGCTGTTCATCGCATTACTCCTGAGGAGGCTAAATACAAGTTGTGCAAAGTGAGGAAGATCTTTGTGGGCACCAA
AGGAATCCCTCACTTGGTGACACACGATGCTCGCACCATTCGCTACCCGGATCCCCTCATTAAGGTTAATGACACCATTC
AGATTGATTTGGAAACTGGCAAGATCACAGATTTCATCAAGTTTGACACTGGTAACCTGTGCATGGTGACTGGAGGTGCT
AATTTGGGAAGAATTGGTGTGATCACCAATAGAGAGAGACATCCTGGTTCTTTTGATGTCGTCCATGTGAAAGATGCCAA
TGGCAATAGCTTTGCCACCCGCCTGTCCAACATTTTTGTGATTGGCAAGGGCAACAAACCATGGATTTCTCTTCCCCGAG
GAAAAAGCATCCGCCTCACCATTGCTGAAGAGAGAGACAAAAGACTGGCAGCCAAGCAGAGCAGTGGCTGA
GCTCCTCGTCCATCCACTGGCCCCCACAAACTGAGAGAGTGTCTTCCACTCATCATTTTCCTAAGGAACAGGCTTAAGTA
TGCTCTGACAGGAGACGAGGTGAAGAAGATCTGCATGCAGCGATTCATTAAGATTGATGGCAAGGTCCGAACTGATATAA
CCTACCCGGCAGGTTTTATGGATGTCATCAGTATTGATAAGACGGGAGAGAATTTCCGGCTGATCTATGACACCAAGGGA
CGCTTTGCTGTTCATCGCATTACTCCTGAGGAGGCTAAATACAAGTTGTGCAAAGTGAGGAAGATCTTTGTGGGCACCAA
AGGAATCCCTCACTTGGTGACACACGATGCTCGCACCATTCGCTACCCGGATCCCCTCATTAAGGTTAATGACACCATTC
AGATTGATTTGGAAACTGGCAAGATCACAGATTTCATCAAGTTTGACACTGGTAACCTGTGCATGGTGACTGGAGGTGCT
AATTTGGGAAGAATTGGTGTGATCACCAATAGAGAGAGACATCCTGGTTCTTTTGATGTCGTCCATGTGAAAGATGCCAA
TGGCAATAGCTTTGCCACCCGCCTGTCCAACATTTTTGTGATTGGCAAGGGCAACAAACCATGGATTTCTCTTCCCCGAG
GAAAAAGCATCCGCCTCACCATTGCTGAAGAGAGAGACAAAAGACTGGCAGCCAAGCAGAGCAGTGGCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014601 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000006337 | possible_ortholog | 3 retrogenes | |
| Equus caballus | ENSECAG00000010852 | possible_ortholog | 6 retrogenes | |
| Homo sapiens | ENSG00000129824 | possible_ortholog | 1 retrogene | |
| Meleagris gallopavo | ENSMGAG00000009671 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000011070 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000005294 | possible_ortholog | 11 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011808 | possible_ortholog | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000022470 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000003201 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sara_202 | 84.57 | 74.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sara_245 | 72.50 | 50.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_sara_297 | 98.31 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_sara_311 | 68.72 | 94.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_sara_321 | 72.33 | 66.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_sara_612 | 97.47 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSARG00000010806 retrocopies