Parental gene: | HMGA2, ENSSSCG00000000471 |
| Aliases: | None |
| Description: | None |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 5:33376170..33516370(+) |
>ENSSSCG00000000471
ATGAGCGCACGCGGTGAAGGCGCCGGGCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGCCCCGGTGCCTCAGAAGAG
AGGACGCGGCCGACCCAGGAAGCAGCAGCAAGAGCCAACCGGTGAGCCCTCTCCTAAGAGACCAAGGGGAAGACCCAAAG
GCAGCAAAAACAAGAGTCCCTCCAAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAAAAACGGCCAAGAGGCAGACCT
AGGAAATGGCCACAGCAAGTCGTTCAGAAGAAGCCTGCTCAGGAGACTGAAGAGACATCCTCACAGGAGTCTGCGGAAGA
GGATTAG
ATGAGCGCACGCGGTGAAGGCGCCGGGCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGCCCCGGTGCCTCAGAAGAG
AGGACGCGGCCGACCCAGGAAGCAGCAGCAAGAGCCAACCGGTGAGCCCTCTCCTAAGAGACCAAGGGGAAGACCCAAAG
GCAGCAAAAACAAGAGTCCCTCCAAAGCAGCTCAAAAGAAAGCAGAAGCCACTGGAGAAAAACGGCCAAGAGGCAGACCT
AGGAAATGGCCACAGCAAGTCGTTCAGAAGAAGCCTGCTCAGGAGACTGAAGAGACATCCTCACAGGAGTCTGCGGAAGA
GGATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 0 .00 RPM |
| SRP014902_testis | 0 .00 RPM |
| SRP018856_adipose | 0 .17 RPM |
| SRP018288_kidney | 0 .00 RPM |
| SRP018288_lung | 0 .41 RPM |
| SRP018288_liver | 0 .00 RPM |
| SRP018288_heart | 0 .18 RPM |
| SRP035408_liver | 0 .00 RPM |
| SRP035408_brain | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000056758 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000031502 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_3 | 85.19 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000000471 retrocopies