Parental gene: | AP1AR, ENSSSCG00000009128 |
| Aliases: | None |
| Description: | adaptor-related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:28808] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 8:118369020..118401177(-) |
>ENSSSCG00000009128
ATGGGGAACTGCTGCTGGACGCAGTGCTTCGGGCTCCTCCGCAGGGAAGCCGGGCGGCTGCAGCGTGTAGGAGGCGGCGG
AGGATCCAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACTATAGAGTTTGAGAATCTAGTAGAAAGCGATGAAG
GAGAAAGCCCAGGAAGCAGCCATAGGCCTCTTACTGAAGAAGAAATTGTTGACCTAAGAGAGAAGCATTATGATTCTATT
GTTGAAAAACAGAAAGATCTTGATATGAAAATCCAAAAGGAGTTAGCCTTACAAGAAGAGAAGTTAAGACTAGAAGAAGA
AGCTTTATACGCTGCACAGCGTGAAGCAGCCAGGGCAGCAAAGCAGCGAAAGCTCTTGGAGCAAGAAAGACAGAGAGTTG
TGCAGCGATACCATCCTTCAAACAATGGAGAATATCAAAGTTCAGGACCAGAAGATGACTTTGAATCTTGTTTGAGAAAT
ATAAAGTCACAATATGAAGTTTTCCGAAGTAGTAGACTCTCATCAGATGCCACAGTTTTGACACCAAATACAGAAAGCAG
TTGTGATTTAATGACCAAAACTAAATCAACTAGTGGAAATGATGACAGTACATCTTTAGATCTAGAATGGGAAGATGAAG
AAGGAATGAATAGAATGCTACCCATGAGAGAACGGTCCAAAACAGAGGAAGACATTCTCCGGGCAGCACTTAAGTACAGC
AGCAAGAAGACTGGAAGTAATCCTACGTCAGCCTCTGATGATTCCAATGGGCTGGAGTGGGAAAATGACTTTGTTAGTGC
CGAAATGGATGATAATGGCAATTCCGAGTATTCGGGATTTGTAAATCCTGTGTTAGAACTGTCTGATTCTGGCCTAAAGC
AATATGACACAGATCAACAAAAACGATAG
ATGGGGAACTGCTGCTGGACGCAGTGCTTCGGGCTCCTCCGCAGGGAAGCCGGGCGGCTGCAGCGTGTAGGAGGCGGCGG
AGGATCCAAGTATTTTAGAACATGCTCAAGAGGTGAGCACTTAACTATAGAGTTTGAGAATCTAGTAGAAAGCGATGAAG
GAGAAAGCCCAGGAAGCAGCCATAGGCCTCTTACTGAAGAAGAAATTGTTGACCTAAGAGAGAAGCATTATGATTCTATT
GTTGAAAAACAGAAAGATCTTGATATGAAAATCCAAAAGGAGTTAGCCTTACAAGAAGAGAAGTTAAGACTAGAAGAAGA
AGCTTTATACGCTGCACAGCGTGAAGCAGCCAGGGCAGCAAAGCAGCGAAAGCTCTTGGAGCAAGAAAGACAGAGAGTTG
TGCAGCGATACCATCCTTCAAACAATGGAGAATATCAAAGTTCAGGACCAGAAGATGACTTTGAATCTTGTTTGAGAAAT
ATAAAGTCACAATATGAAGTTTTCCGAAGTAGTAGACTCTCATCAGATGCCACAGTTTTGACACCAAATACAGAAAGCAG
TTGTGATTTAATGACCAAAACTAAATCAACTAGTGGAAATGATGACAGTACATCTTTAGATCTAGAATGGGAAGATGAAG
AAGGAATGAATAGAATGCTACCCATGAGAGAACGGTCCAAAACAGAGGAAGACATTCTCCGGGCAGCACTTAAGTACAGC
AGCAAGAAGACTGGAAGTAATCCTACGTCAGCCTCTGATGATTCCAATGGGCTGGAGTGGGAAAATGACTTTGTTAGTGC
CGAAATGGATGATAATGGCAATTCCGAGTATTCGGGATTTGTAAATCCTGTGTTAGAACTGTCTGATTCTGGCCTAAAGC
AATATGACACAGATCAACAAAAACGATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 11 .28 RPM |
| SRP014902_testis | 10 .89 RPM |
| SRP018856_adipose | 7 .34 RPM |
| SRP018288_kidney | 20 .10 RPM |
| SRP018288_lung | 17 .21 RPM |
| SRP018288_liver | 11 .83 RPM |
| SRP018288_heart | 9 .56 RPM |
| SRP035408_liver | 16 .23 RPM |
| SRP035408_brain | 17 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007262 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000005746 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004413 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001631 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_245 | 86.78 | 79.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000009128 retrocopies