Parental gene: | PLEKHA1, ENSSSCG00000010702 |
| Aliases: | None |
| Description: | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 [Source:HGNC Symbol;Acc:14335] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 14:143414801..143468369(+) |
>ENSSSCG00000010702
ATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGGGAAATTTCTTCG
GAGGTATTTCATACTGGATACCAGAGAAGATAGCTTTGTATGGTACATGGATAATCCACAGAACCTGCCTTCTGGATCAT
CACGCGTTGGAGCCATTAAACTTACCTACATTTCAAAGGTTAGCGATGCAACTAAGCTAAGGCCAAAGGCTGAGTTCTGT
TTTGTTATGAATGCAGGGATGAGGAAGTACTTCCTACAAGCCAATGATCAGCAGGACCTAGTAGAATGGGTCAATGTGTT
GAACAAAGCTATAAAAATTACAGTACCAAAGCAGTCAGACTCACAGCCTCATTCTGACAACCCAAGTCGCCAGGGCGAAT
GTGGGAAGAAGCAAGTGTCTTACAGAACTGACATTGTTGGTGGTGTGCCCATCATCACCCCAACTCAGAAAGAAGACGTA
AATGAATGTGGTGAAAGTATTGACAGAAATAATCTGAAACGGTCCCAAAGCCATCTTCCTTACTTTCCTCCGAAACCGCC
CCCGGATAGTGCAGTTATCAAAGCTGGATATTGTGTAAAACAAGGAGCAGTGATGAAAAACTGGAAGAGAAGATATTTTC
AATTGGATGAAAACACAATAGGCTACTTCAAATCTGAACTGGAAAAGGAACCTCTCCGCGTAATACCGCTTAAAGAGGTT
CATAAAGTCCAAGAATGTAAGCAAAGCAGTGACATAATGATGAGGGACAACCTCTTTGAAATTGTAACATCGTCTCGAAC
TTTCTATGTGCAGGCCGATAGCCCGGAAGAGATGCACAGCTGGATTAAAGCCGTCTCTGGCGCCATCGTAGCACAGCGGG
GGCCCGGCAGATCCGCTTCCTCTATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGTATACGCCAAGAGCT
GGGGAATGCAGCACACTCATGCCTGCGTATGCATTGGATAGACTGCATGCACGGCGTCTCACACCTCAGGCTTTACCGTG
GAGAAGCGAGGATTTTACGAATCTCTTGCCAAGGTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACC
AGCTCCCAAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 15 .66 RPM |
| SRP014902_testis | 21 .50 RPM |
| SRP018288_heart | 21 .71 RPM |
| SRP018288_kidney | 18 .62 RPM |
| SRP018288_liver | 8 .64 RPM |
| SRP018288_lung | 35 .84 RPM |
| SRP018856_adipose | 12 .49 RPM |
| SRP035408_brain | 4 .57 RPM |
| SRP035408_liver | 7 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001251 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010036 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004811 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_416 | 78.60 | 79.05 | Please wait, loading  |
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Download FASTA sequences of all ENSSSCG00000010702 retrocopies