Parental gene:

PMM2, ENSSSCG00000021236

Aliases:None
Description:phosphomannomutase 2 [Source:HGNC Symbol;Acc:9115]
Organism:Pig (Sus scrofa)
Coordinates:3:34789971..34802901(-)


>ENSSSCG00000021236
TTCATCGCCAGGGGTACCTTCATTGAATTCCGAAACGGGATGTTGAACGTGTCTCCCATCGGAAGGAGCTGCAGCCAAGA
AGAACGCATTGAGTTCTACGAACTTGACAAAAAAGAAAATATCAGACAAAAATTCGTGGAGGATCTGCGGCAAGAGTTTG
CAGGGAAAGGCCTCACATTTTCCATAGGAGGCCAGATCAGCTTTGATGTCTTCCCCGACGGCTGGGACAAGAGGTACTGC
CTGGGGCACGTGGAGAAGGACGGCTATAAGACCATTTATTTCTTTGGAGACAAAACTATGCCTGGCGGGAACGACCACGA
GATCTTTGAGGACCCCCGGACCGTGAGCTACACCGTGACGGCGCCCGAGGACACCCGCAGGATCTGCCAGGAGCTCTTCT
GCTGA

Library Parental gene expression (RPM)
SRP014902_placenta 39 .16 RPM
SRP014902_testis 36 .07 RPM
SRP018288_heart 10 .58 RPM
SRP018288_kidney 70 .33 RPM
SRP018288_liver 42 .06 RPM
SRP018288_lung 46 .33 RPM
SRP018856_adipose 22 .79 RPM
SRP035408_brain 16 .80 RPM
SRP035408_liver 60 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001440 possible_ortholog 2 retrogenes
retro_btau_1188, retro_btau_307,
Cavia porcellus ENSCPOG00000000235 ortholog_one2one 1 retrogene
retro_cpor_810,
Homo sapiens ENSG00000140650 ortholog_one2one 2 retrogenes
retro_hsap_1869, retro_hsap_1913,
Gorilla gorilla ENSGGOG00000010124 ortholog_one2one 1 retrogene
retro_ggor_1399,
Monodelphis domestica ENSMODG00000005737 ortholog_many2many 1 retrogene
retro_mdom_285,
Nomascus leucogenys ENSNLEG00000010062 ortholog_one2one 1 retrogene
retro_nleu_3062,
Otolemur garnettii ENSOGAG00000016560 ortholog_one2many 1 retrogene
retro_ogar_1095,
Pongo abelii ENSPPYG00000007084 ortholog_one2one 2 retrogenes
retro_pabe_1583, retro_pabe_1584,
Pan troglodytes ENSPTRG00000007748 ortholog_one2one 2 retrogenes
retro_ptro_1249, retro_ptro_1279,
Sus scrofa ENSSSCG00000000061 within_species_paralog 1 retrogene
retro_sscr_869,
Tursiops truncatus ENSTTRG00000014827 possible_ortholog 2 retrogenes
retro_ttru_1894, retro_ttru_977,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_329 62.89 71.64
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Download FASTA sequences of all ENSSSCG00000021236 retrocopies