Parental gene:

LSM14A, ENSSTOG00000002785

Aliases:None
Description:LSM14A, SCD6 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:24489]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393380.1:1730412..1791582(-)


>ENSSTOG00000002785
ATGCCAACATACAGTCAGTTCAGTCCAAGTTCATTAGTCGGGCAGCAGTTTGGTGCTGTTGGTGTTGCTGGAAGCTCCTT
GACATCTTTTGGAACAGAAACATCAAACAGTGGTACCTTGTCCCAAAGTAGTGCAGTTGGTTCTGCATTTACACAGGATA
CAAGATCTATAAAAACACAGTTATCTCAAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGTCCAACCATGGAA
CAAGCAGTACAGACCGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTATCAACCAGGCCTTT
GCCATCTACCAGCCAAAAAGCAATAGAGAACCAAGAGCACAGGCGAGCTGAAGTACACAAAGTTTCAAGGCCAGAAAATG
AGCAACTCAGAAATGATAACAAGAGACAAGTGGTTCCAGGTGCTTCCTCAGCTCCAAGGAGAGGGCGAGGAGGTCATCGA
GGTGGCAGGGGAAGATTTGGTATTCGGCGGGATGGTCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGC
ACAATTTAACAAGGAGGAGATTGACAGAGAGTTTCATAATAAACTTAAATTAAAAGAAGATAAACTTGAGAAACAAGAGA
AGCCAGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACTCAAAACAGTGAAGGAAATGCTGATGAAGAAGATCCA
CTTGGACCTAATTGCTATTATGACAAAACCAAGTCCTTCTTTGATAATATTTCGTGTGATGATAATAGAGAACGAAGACC
AACCTGGGCTGAAGAAAGAAGATTAAATGCTGAAACATTTGGGATTCCACTTCGTCCAAACCGTGGTCGTGGAGGGTACA
GAGGCAGAGGAGGTCTTGGTTTCCGTGGTGGCAGAGGGCGTGGTGGTGGCAGAGGTGGTACATTTACTACCCCTCGAGGA
TTTCGTGGTGGATTCAGAGGAGGTCGTGGGGGCAGGGAGTTTGCAGATTTTGAATATAGGAAAACCACAGCTTTTGGACC
CTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006555 ortholog_one2one 1 retrogene
retro_chof_1375,
Callithrix jacchus ENSCJAG00000010360 ortholog_one2one 5 retrogenes
retro_cjac_1582, retro_cjac_2625, retro_cjac_3201, retro_cjac_3327, retro_cjac_840,
Gorilla gorilla ENSGGOG00000001762 ortholog_one2one 1 retrogene
retro_ggor_2378,
Microcebus murinus ENSMICG00000011598 ortholog_one2one 1 retrogene
retro_mmur_1605,
Myotis lucifugus ENSMLUG00000003368 ortholog_one2many 1 retrogene
retro_mluc_1793,
Macaca mulatta ENSMMUG00000021614 ortholog_one2many 2 retrogenes
retro_mmul_1386, retro_mmul_1860,
Nomascus leucogenys ENSNLEG00000011713 ortholog_one2one 4 retrogenes
retro_nleu_1299, retro_nleu_2544, retro_nleu_2580, retro_nleu_485,
Oryctolagus cuniculus ENSOCUG00000011872 ortholog_one2many 2 retrogenes
retro_ocun_193, retro_ocun_860,
Otolemur garnettii ENSOGAG00000002492 ortholog_one2one 2 retrogenes
retro_ogar_2586, retro_ogar_67,
Pongo abelii ENSPPYG00000009832 ortholog_one2one 2 retrogenes
retro_pabe_1693, retro_pabe_2906,
Pan troglodytes ENSPTRG00000010813 ortholog_one2one 3 retrogenes
retro_ptro_1343, retro_ptro_2389, retro_ptro_863,
Rattus norvegicus ENSRNOG00000021133 ortholog_one2many 1 retrogene
retro_rnor_2397,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_170 81.45 98.27
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Download FASTA sequences of all ENSSTOG00000002785 retrocopies