Parental gene:

ENSSTOG00000020783

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393352.1:3860887..3976817(-)


>ENSSTOG00000020783
CCACCCAAGGATGACAAGAAGAAGAAAGACGCCGGAAAGTCGGCTAAGAAAGACAAGGACCCAGTGAACAAATCTGGGGG
CAAAGCCAAAAAGAAGAAGTGGTCCAAAGGCAAAGTTCGGGACAAGCTCAACAATTTAGTCTTGTTTGACAAAGCTACTT
ATGACAAACTCTGTAAGGAAGTTCCCAACTATAAGCTTATTACCCCAGCTGTGGTCTCTGAGAGACTGAAGATTCGAGGT
TCCCTGGCCAGGGCAGCCCTTCAGGAGCTCCTCAGTAAAGGACTTATCAAACTGGTTTCAAAGCATAGAGCTCAAGTAAT
TTATACCAGAAATACCAAGGGTGGAGATGCCCCAGCTGCTGGTGAAGATGCATGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012395 possible_ortholog 3 retrogenes
retro_cfam_500, retro_cfam_680, retro_cfam_984,
Felis catus ENSFCAG00000001151 possible_ortholog 3 retrogenes
retro_fcat_1792, retro_fcat_601, retro_fcat_903,
Latimeria chalumnae ENSLACG00000017531 possible_ortholog 4 retrogenes
retro_lcha_101, retro_lcha_118, retro_lcha_50, retro_lcha_72,
Macropus eugenii ENSMEUG00000014185 possible_ortholog 3 retrogenes
retro_meug_1181, retro_meug_1562, retro_meug_174,
Microcebus murinus ENSMICG00000002687 possible_ortholog 8 retrogenes
retro_mmur_1023, retro_mmur_1514, retro_mmur_229, retro_mmur_308, retro_mmur_387, retro_mmur_425, retro_mmur_485, retro_mmur_688,
Macaca mulatta ENSMMUG00000016894 ortholog_one2one 2 retrogenes
retro_mmul_137, retro_mmul_71,
Ochotona princeps ENSOPRG00000016194 possible_ortholog 9 retrogenes
retro_opri_1099, retro_opri_1204, retro_opri_256, retro_opri_320, retro_opri_393, retro_opri_493, retro_opri_64, retro_opri_854, retro_opri_873,
Vicugna pacos ENSVPAG00000000266 possible_ortholog 4 retrogenes
retro_vpac_106, retro_vpac_118, retro_vpac_337, retro_vpac_546,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_87 95.16 100.00
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2. retro_itri_196 73.95 94.35
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3. retro_itri_1491 69.60 100.00
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Download FASTA sequences of all ENSSTOG00000020783 retrocopies