Parental gene: | COPS8, ENSSTOG00000022662 |
| Aliases: | None |
| Description: | COP9 signalosome subunit 8 [Source:HGNC Symbol;Acc:24335] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393335.1:1168082..1180364(-) |
>ENSSTOG00000022662
ATGCCAGTGGCGGTGATGGCGGAAGGCGCTTTCAGTTTCAAAAAGTTGCTGGATCAGTGCGAGAACCAAGAGCTCGAGGC
TCCTGGAGGAATTGCTACACCCCCAGTGTATGGTCAGCTTTTAGCTTTATATTTGCTTCACAATGACATGAATAATGCAA
GATATCTTTGGAAAAGGATACCACCTGCTATAAAATCTGCAAATTCTGAACTTGGGGGAATTTGGTCAGTAGGACAGAGA
ATCTGGCAGCGGGATTTCCCTGGTATCTACATGACCATCAGCGCCCACCAGTGGTCTGAGACAGTACAGCCAATCATGGA
CGCACTTAGAGATGCCACAAGGAGACGCGCCTTTGCCCTGGTCTCTCAAGCATACACCTCGATAATCGCTGATGATTTTG
CAGCTTTTGTTGGACTTCCTGTAGAAGAGGCTGTGAAAGGTATACTAGAACAAGGATGGCAAGCCGACTCCACCACCAGA
ATGGTTCTGCCCAGAAAGCCAGTTGCAGGGGCCCTGGATGTTTCCTTTAACAGGTTTATTCCTTTATCAGAGCCTGCCCC
AGTTCCACCAATCCCCAATGAACAGCAATTGGCCAGACTGACCGATTATGTGGCTTTCCTTGAAAATTGA
ATGCCAGTGGCGGTGATGGCGGAAGGCGCTTTCAGTTTCAAAAAGTTGCTGGATCAGTGCGAGAACCAAGAGCTCGAGGC
TCCTGGAGGAATTGCTACACCCCCAGTGTATGGTCAGCTTTTAGCTTTATATTTGCTTCACAATGACATGAATAATGCAA
GATATCTTTGGAAAAGGATACCACCTGCTATAAAATCTGCAAATTCTGAACTTGGGGGAATTTGGTCAGTAGGACAGAGA
ATCTGGCAGCGGGATTTCCCTGGTATCTACATGACCATCAGCGCCCACCAGTGGTCTGAGACAGTACAGCCAATCATGGA
CGCACTTAGAGATGCCACAAGGAGACGCGCCTTTGCCCTGGTCTCTCAAGCATACACCTCGATAATCGCTGATGATTTTG
CAGCTTTTGTTGGACTTCCTGTAGAAGAGGCTGTGAAAGGTATACTAGAACAAGGATGGCAAGCCGACTCCACCACCAGA
ATGGTTCTGCCCAGAAAGCCAGTTGCAGGGGCCCTGGATGTTTCCTTTAACAGGTTTATTCCTTTATCAGAGCCTGCCCC
AGTTCCACCAATCCCCAATGAACAGCAATTGGCCAGACTGACCGATTATGTGGCTTTCCTTGAAAATTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005854 | ortholog_one2one | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000030168 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002267 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000015309 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000198612 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000008189 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000021605 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000007474 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000068 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000034432 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010706 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000007341 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000013308 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019635 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000015944 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000002196 | ortholog_one2one | 7 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013614 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_296 | 69.35 | 59.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_itri_1065 | 79.05 | 50.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_itri_1383 | 78.86 | 57.89 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_itri_1737 | 81.98 | 53.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000022662 retrocopies