Parental gene:

TMEM50B, ENSSTOG00000023740

Aliases:None
Description:transmembrane protein 50B [Source:HGNC Symbol;Acc:1280]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393310.1:8825818..8873488(+)


>ENSSTOG00000023740
ATGGCAGGCTTCCTAGATAATTTCCGATGGCCAGAATGTGAATGTATTGACTGGAGTGAGAGAAGAAATGCCGTGGCTTC
TGTAGTCGCAGGAATATTGTTTTTCACAGGTTGGTGGATCATGATTGACGCAGCTGTGGTGTATCCAAAGCCAGAACAGT
TGAACCATGCTTTTCACACATGTGGTGTATTTTCCACATTGGCTTTCTTCATGATAAATGCTGTGTCCAACGCTCAGGTG
AGAGGTGACAGCTATGAAAGCGGCTGTTTAGGAAGAACAGGTGCTCGAGTTTGGCTCTTCATTGGTTTCATGTTGATGTT
TGGGTCACTAATTGCTTCCATGTGGATTCTTTTTGGTGCATATGTTACCCAAAATACTGATGTTTATCCGGGACTGGCTG
TCTTTTTTCAAAATGCTCTTATATTTTTTAGCACTCTGATCTACAAATTTGGAAGAACTGAAGAGCTCTGGACCTGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003928 ortholog_one2one 1 retrogene
retro_chof_422,
Myotis lucifugus ENSMLUG00000012388 ortholog_one2one 1 retrogene
retro_mluc_970,
Nomascus leucogenys ENSNLEG00000003887 ortholog_one2one 1 retrogene
retro_nleu_2077,
Pan troglodytes ENSPTRG00000013869 ortholog_one2one 1 retrogene
retro_ptro_1379,
Ictidomys tridecemlineatus ENSSTOG00000022246 within_species_paralog 2 retrogenes
retro_itri_1228, retro_itri_1329,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_678 58.33 64.56
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Download FASTA sequences of all ENSSTOG00000023740 retrocopies