RetrogeneDB ID: | retro_mluc_970 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429786:8407853..8408225(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TMEM50B | ||
Ensembl ID: | ENSMLUG00000012388 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 91.13 % |
Parental protein coverage: | 78.48 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAGFLDNVRWPEWECIDWSERRNAVASVVAGVLFSAGWWVMIDAAVVYAKPEQLNPAFHTCGVFSTLAFF |
MAGFLDN..WPEWECIDWSERRNAVASVVAG.LFS.GWWVMI..AVVYAKPEQ.NP.FHTCGVFSTLAFF | |
Retrocopy | MAGFLDNIHWPEWECIDWSERRNAVASVVAGILFSTGWWVMINTAVVYAKPEQVNPTFHTCGVFSTLAFF |
Parental | MINAVSNAQVRGDSYESGCLGRTGARVWLFIGFMLMFGSLIASMWILFGAYVTQ |
MINAV.NAQVRGDSYESGCLGRT.ARVWLFIGFMLMF.SLIASMWILFGAYVTQ | |
Retrocopy | MINAVYNAQVRGDSYESGCLGRTDARVWLFIGFMLMFLSLIASMWILFGAYVTQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000003928 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000034844 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000012388 | 1 retrocopy |
retro_mluc_970 ,
|
Nomascus leucogenys | ENSNLEG00000003887 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000013869 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000023740 | 1 retrocopy |