Parental gene: | KN538817.1_FG009 |
| Aliases: | None |
| Description: | None |
| Organism: | Longstamen rice (Oryza longistaminata) |
| Coordinates: | KN538817.1:152232..159927(+) |
>KN538817.1_FG009
ATGTATGTTGCTATATATGTCTATGGCTATGGCGTGACTATGAGCTCGGTGTTGCCCACTATACGAGGGTATTGTCTCAT
CGACCTTATTGGTGACAATCGCAATGTAGCGTTGAGGCTAAGCGCCAGTTACATCATGGAGATAGTGTCGAGGCATATGC
TGGTGGTGAGAAATGCTAAAGCGGATGTCTGCCATGCCTACCAGATCATGAAGAGGGGCGGGCTCAAGGACGAGAACATC
ATCGTCTTCATGTACGATGACATCGCGCACAACCCGGAGAATCCGAGGCCTGGTGTCATCATCAACCATCCCCAGGGTGG
CGATGTCTATGCTGGGGTCCCGAAGGATTACACTGGGAAGGAGGTTAATGTCAAGAACTTGTTTGCTGTTCTGCTCGGTA
ACAAAACTGCTGTCAAAGGTGGGAGTGGCAAAGTCCTGGACAGTGGCCCCAACGATCATATTTTCATTTTTTACAGTGAC
CATGGGGGTCCTGGTGTCCTTGGGATGCCAACCTATCCATACCTCTACGGTGATGATCTTGTAGATGTTCTGAAGAAGAA
GCATGCTGCTGGGACGTACAAAAGCCTGGTCTTTTACCTTGAAGCCTGTGAATCTGGAAGCATCTTTGAGGGTCTATTGC
CAAATGACATCAATGTTTATGCCACCACTGCATCAAACGCTGATGAGAGCAGCTGGGGAACATACTGCCCTGGGGAGTAC
CCGAGCCCACCTCCGGAGTACGACACATGCCTAGGGGACTTGTACAGCGTTGCTTGGATGGAAGACAGCGATGTCCACAA
CCTGAGAACTGAATCACTCAAGCAGCAGTACAATCTCGTCAAGGAAAGGACATCTGTGCAGCACACATATTACTCTGGGT
CACATGTGATGGAATACGGTTCTTTAGAGCTGAATGCCCATCATGTGTTCATGTACATGGGTTCCAATCCGGCTAACGAC
AATGCTACATTTGTGGAAGATAACTCGTTGCCATCGTTCTCAAGGGCTGTTAATCAGCGGGATGCTGACCTGGTTTACTT
CTGGCAGAAGTACCGCAAATTGCCTGAGAGTTCTCCTGAGAAAAACGAAGCTCGGAAGCAATTGCTTGAAATGATGGCAC
ACAGATCTCATGTTGACAACAGTGTTGAGCTGATCGGAAACCTTCTCTTTGGCTCTGAGGAAGGCCCAAGGGTTCTAAAG
GCTGTTCGTGCAACTGGCGAACCTCTTGTTGATGACTGGAGCTGTCTCAAGTCTATGCAGTTAGTATGTGATAATCTATT
TTGTACCAGCACACCTAATATGGGTCTGCATTTTCTTCAGGGCAAAGCAAAGACAGTACCATACCAGTACAACCAAAGTT
ATGCATACCTAGGAAGTAGGAAATACAAAACTATAGTGATGTTTGATAGAAATTGGATCAAATTCAACGCCATTTTGATA
GGTTACAATTACATCCGTCTGATAAAAAACAGCCATAATCCAATTCGAAAGAATTGCTACGCGAACCTGACAGAGGAAGA
GTCTTCTTATTTAGCATGA
ATGTATGTTGCTATATATGTCTATGGCTATGGCGTGACTATGAGCTCGGTGTTGCCCACTATACGAGGGTATTGTCTCAT
CGACCTTATTGGTGACAATCGCAATGTAGCGTTGAGGCTAAGCGCCAGTTACATCATGGAGATAGTGTCGAGGCATATGC
TGGTGGTGAGAAATGCTAAAGCGGATGTCTGCCATGCCTACCAGATCATGAAGAGGGGCGGGCTCAAGGACGAGAACATC
ATCGTCTTCATGTACGATGACATCGCGCACAACCCGGAGAATCCGAGGCCTGGTGTCATCATCAACCATCCCCAGGGTGG
CGATGTCTATGCTGGGGTCCCGAAGGATTACACTGGGAAGGAGGTTAATGTCAAGAACTTGTTTGCTGTTCTGCTCGGTA
ACAAAACTGCTGTCAAAGGTGGGAGTGGCAAAGTCCTGGACAGTGGCCCCAACGATCATATTTTCATTTTTTACAGTGAC
CATGGGGGTCCTGGTGTCCTTGGGATGCCAACCTATCCATACCTCTACGGTGATGATCTTGTAGATGTTCTGAAGAAGAA
GCATGCTGCTGGGACGTACAAAAGCCTGGTCTTTTACCTTGAAGCCTGTGAATCTGGAAGCATCTTTGAGGGTCTATTGC
CAAATGACATCAATGTTTATGCCACCACTGCATCAAACGCTGATGAGAGCAGCTGGGGAACATACTGCCCTGGGGAGTAC
CCGAGCCCACCTCCGGAGTACGACACATGCCTAGGGGACTTGTACAGCGTTGCTTGGATGGAAGACAGCGATGTCCACAA
CCTGAGAACTGAATCACTCAAGCAGCAGTACAATCTCGTCAAGGAAAGGACATCTGTGCAGCACACATATTACTCTGGGT
CACATGTGATGGAATACGGTTCTTTAGAGCTGAATGCCCATCATGTGTTCATGTACATGGGTTCCAATCCGGCTAACGAC
AATGCTACATTTGTGGAAGATAACTCGTTGCCATCGTTCTCAAGGGCTGTTAATCAGCGGGATGCTGACCTGGTTTACTT
CTGGCAGAAGTACCGCAAATTGCCTGAGAGTTCTCCTGAGAAAAACGAAGCTCGGAAGCAATTGCTTGAAATGATGGCAC
ACAGATCTCATGTTGACAACAGTGTTGAGCTGATCGGAAACCTTCTCTTTGGCTCTGAGGAAGGCCCAAGGGTTCTAAAG
GCTGTTCGTGCAACTGGCGAACCTCTTGTTGATGACTGGAGCTGTCTCAAGTCTATGCAGTTAGTATGTGATAATCTATT
TTGTACCAGCACACCTAATATGGGTCTGCATTTTCTTCAGGGCAAAGCAAAGACAGTACCATACCAGTACAACCAAAGTT
ATGCATACCTAGGAAGTAGGAAATACAAAACTATAGTGATGTTTGATAGAAATTGGATCAAATTCAACGCCATTTTGATA
GGTTACAATTACATCCGTCTGATAAAAAACAGCCATAATCCAATTCGAAAGAATTGCTACGCGAACCTGACAGAGGAAGA
GTCTTCTTATTTAGCATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Zea mays | GRMZM2G093032 | ortholog_one2many | 1 retrogene | |
| Oryza brachyantha | OB01G29280 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART01G19640 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM01G23260 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI01G18100 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC01G20010 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0161200 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0559600 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_olon_1 | 59.84 | 70.31 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all KN538817.1_FG009 retrocopies