Parental gene: | OGLUM05G09560 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza glumaepatula |
| Coordinates: | 5:9948801..9951377(-) |
>OGLUM05G09560
ATGCATATGAGGATGGTCGCCAACCTCCAAAAAGTTTGTTTCTTCCTTCCCGCCATCTCCCACCTCTCCCGCCATCTATC
TCTGACCTCTCCTCTGCACATGCTCATCAGCTTCCCGTTCACTGCTCAAATGGCGTGCTTCCTGGTCGCGGCGGCGGTGG
TGGCGTTGGCTGCGGCGGCGGCGGCGCCGGCGAGGGCTATCCCGTTCACGGAGAACGATCTCTCGTCGGAGGAGAGCCTG
CGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCGGCATCAGGAGGCGTTGGCAACGACGACGG
CGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACGTCCACGAGGCGAACAGTAGGAGGGGCGGCCGGC
CGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGGCGCACCTACGCGGGCTCCAGGGCGCGC
CACCACCGCAGCCTGAGCGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGAGGACGAGGACAACCTGCC
GCCGGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCT
CGGCGGTGGCGGCGGTGGAGGGCGTGAACAAGATCAAGACGGGGAGGCTGGTGGCGCTGTCGGAGCAGGAGCTGGTGGAC
TGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGACTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGAT
CACCACCGAGTCCAACTACCCATACAGAGCGGAGCAAGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGA
TTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTTGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCA
ATAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTGGACCATGG
TGTTGCCGCCGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTCGTGGGGCGAGGATTGGG
GCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGGCTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCT
TACCCTGTCAAATCAGGAGCACGCGATGCTGCTGCAAGTAACAGAGTTGTTAAAGACGAGCTGTGA
ATGCATATGAGGATGGTCGCCAACCTCCAAAAAGTTTGTTTCTTCCTTCCCGCCATCTCCCACCTCTCCCGCCATCTATC
TCTGACCTCTCCTCTGCACATGCTCATCAGCTTCCCGTTCACTGCTCAAATGGCGTGCTTCCTGGTCGCGGCGGCGGTGG
TGGCGTTGGCTGCGGCGGCGGCGGCGCCGGCGAGGGCTATCCCGTTCACGGAGAACGATCTCTCGTCGGAGGAGAGCCTG
CGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCGGCATCAGGAGGCGTTGGCAACGACGACGG
CGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACGTCCACGAGGCGAACAGTAGGAGGGGCGGCCGGC
CGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGGCGCACCTACGCGGGCTCCAGGGCGCGC
CACCACCGCAGCCTGAGCGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGAGGACGAGGACAACCTGCC
GCCGGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCT
CGGCGGTGGCGGCGGTGGAGGGCGTGAACAAGATCAAGACGGGGAGGCTGGTGGCGCTGTCGGAGCAGGAGCTGGTGGAC
TGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGACTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGAT
CACCACCGAGTCCAACTACCCATACAGAGCGGAGCAAGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGA
TTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTTGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCA
ATAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTGGACCATGG
TGTTGCCGCCGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTCGTGGGGCGAGGATTGGG
GCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGGCTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCT
TACCCTGTCAAATCAGGAGCACGCGATGCTGCTGCAAGTAACAGAGTTGTTAAAGACGAGCTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI4G19707 | ortholog_one2one | 2 retrogenes | |
| Zea mays | GRMZM2G099765 | ortholog_one2one | 1 retrogene | |
| Hordeum vulgare | MLOC_73076 | ortholog_one2one | 2 retrogenes | |
| Oryza barthii | OBART11G08490 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI11G07520 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si026545m.g | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oglu_31 | 71.49 | 52.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OGLUM05G09560 retrocopies