Parental gene:

Si026545m.g

Aliases:None
Description:None
Organism:Foxtail millet (Setaria italica)
Coordinates:8:18377261..18379496(-)


>Si026545m.g
ATGTTGAGGTGCTTCCTGCTTGCTGCAGTGCTGGCGCTGGCGCTTGCTCCGGCGCGGGGAATCCCGTTCACGGACAAGGA
CCTGGCGTCGGAGGAGAGCCTGCGCGGTCTGTACGAGCGCTGGCGCAGACACTACATGGTGGCGCGGCCAGGCCTGCAGG
AGGACGACGACAAGGCCCGCCGGTTCAACGTGTTCAAGGAGAACGTGCGGTACATCCACGAGGCGAACAAGAAGGACCGG
CCGTTCAGGCTGGCCCTCAACAAGTTCGCCGACATGACAACCGACGAGTTCCGGCGGACGTACGCTGGCTCCCGGGTGCG
GCACCACCGTGCCCTCAGCGGAGGCCGTCGTGCCGAGGGGAGCTTCATGTACGCAGATGCCGGTAGCCTGCCGCCGGCAG
TGGACTGGCGGCAGCGGGGCGCGGTCACCGGCATCAAGGACCAGGGCCAATGCGGGAGCTGCTGGGCATTCTCGACGATT
GCGGCCGTGGAGGGCATCAACAAGATCAGGACAGGGAAACTGGTATCGCTGTCGGAGCAGGAGCTCGTGGACTGCGACGA
CGGCGACAACCAAGGCTGCAACGGCGGGCTGATGGACTATGCGTTCCAGTACATCAAGAGGAATGGAGGGATCACCACCG
AGTCCAACTACCCTTATCTTGCGGAGCAGAGGGGGTGTAACAGGGCAAAGGAACGCTCCCATGACGTGACAATAGATGGC
TATGAGGATGTCCCTGCTAACAATGAAGATGCTTTACAGAAAGCCGTTGCAAACCAGCCGGTGGCTGTTGCAATCGACGC
TAGCGGCCAAGATTTCCAGTTCTATTCAGAGGGTGTCTTCACTGGAAGTTGTGGCACGGACCTTGACCATGGAGTTGCCG
CTGTTGGGTATGGTATAACTCGAGATGGCACTAAATATTGGATAGTGAAGAACTCATGGGGCGAGGACTGGGGTCAGAGG
GGCTACATCAGAATGCAACGCGGTGTGTCAGACTCCCAAGGGCTGTGTGGCATCGCAATGGAGCCATCTTACCCAACTAA
GTCAGCACGACATGCTACTATCATCGAAGATCTCAAAGATAAGCTCTAG

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI4G19707 ortholog_one2one 2 retrogenes
retro_bdis_26, retro_bdis_41,
Zea mays GRMZM2G099765 ortholog_one2one 1 retrogene
retro_zmay_16,
Hordeum vulgare MLOC_73076 ortholog_one2one 2 retrogenes
retro_hvul_23, retro_hvul_68,
Oryza barthii OBART11G08490 ortholog_one2one 1 retrogene
retro_obar_27,
Oryza glumaepatula OGLUM05G09560 ortholog_one2one 1 retrogene
retro_oglu_31,
Oryza meridionalis OMERI11G07520 ortholog_one2one 1 retrogene
retro_omer_2,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sita_27 63.51 80.94
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Download FASTA sequences of all Si026545m.g retrocopies