Parental gene: | OMERI01G33590, OMERI01G33590 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza meridionalis |
| Coordinates: | 1:34288737..34290162(+) |
>OMERI01G33590
ATGGAGCCTCCTCAACTCGACGGCCAGTGCGGGGGCGAGCCACTGGCATCCGTGGCGGACGTCGCGTTCATGCCGTATGC
CACTGCGGACTCCTCGCTGCGCGCCATGGCCGGTCAGGCCGAGGGCTTCGGCCGCCACGCCATCGGCGGCCTCCACGGCG
ACGTCTACCACGTCACGACCCTCGAGGACGACGGGGACGGGTCGCTCCGGGAGGGTTGCCGGAGGCGCGAGCCGCTGTGG
ATCGTCTTCGACGTGTCGGGCACCATCCACCTCTCGACGGGACTGCGCGTGTCGTCGTACAAGACCATCGACGGCCGCGG
GCAGCGGGTGACACTGTCCGGCAAGGGGCTCCAGCTGCGGGAGTGCGAGCACGTGATCGTCTGCAACCTGGAGGTGGAAG
GGTGCCGCGGGCACGACGCCGACGCCGTGGCGGTGAAGCCCGGGTCGCGGCACGTGTGGATCGACCGGTGCGGCCTCCGC
GGCTGCGGCGACGGCCTCCTCGACGTCACCCGGGGCAGCACGGACGTGACCGTGTCCAGGTGCCGCTTCTCGGCGCACGA
CAAGGCCGTGCTGATCGGCGGCAGCGCCGGCCACGTCGAGGACCGCGCCATCCGGGTGACCATCCACCACTGCCTGTTCG
ACGGCACGCGGCAGAGGCACCCGCGCGTCCGCTTCGGCAGGGTGCACCTCTACAACAACTACACCAGGGGCTGGGGCATT
TACGCTGTCTGCGCCAGCGTCGAGTCACAGATTGTATCCCAGTGCAACATTTACGAGGCAGGGGAGAAGAAGAAAGTCTT
CAAGTACATGACAGAACAGGCGGCAGACAGAGACCAGAGTTCAACTGGGTTCATCCGGTCTGAAGGCGACCTGTTCCTGA
ACGGTGCTGAGGAGTGCGCTGCTCATGATTCAGAAGCAGCGGCAGATGAGTTGTGGGACTTCAAGATTCAGGAATTGGAT
TTCTACCAGTCTTGTTCGGTTCAACCAGCGTCAATGGCGCTCAAGAAGCTACTTGAGTGCTTCACTGGCTGGCAGCCAGT
TCCGCTGCCGGAAGACACCTGCCTCGAAGAGGAAACTGATTCTGCTCCTGCTGACACTACCGCTTGA
ATGGAGCCTCCTCAACTCGACGGCCAGTGCGGGGGCGAGCCACTGGCATCCGTGGCGGACGTCGCGTTCATGCCGTATGC
CACTGCGGACTCCTCGCTGCGCGCCATGGCCGGTCAGGCCGAGGGCTTCGGCCGCCACGCCATCGGCGGCCTCCACGGCG
ACGTCTACCACGTCACGACCCTCGAGGACGACGGGGACGGGTCGCTCCGGGAGGGTTGCCGGAGGCGCGAGCCGCTGTGG
ATCGTCTTCGACGTGTCGGGCACCATCCACCTCTCGACGGGACTGCGCGTGTCGTCGTACAAGACCATCGACGGCCGCGG
GCAGCGGGTGACACTGTCCGGCAAGGGGCTCCAGCTGCGGGAGTGCGAGCACGTGATCGTCTGCAACCTGGAGGTGGAAG
GGTGCCGCGGGCACGACGCCGACGCCGTGGCGGTGAAGCCCGGGTCGCGGCACGTGTGGATCGACCGGTGCGGCCTCCGC
GGCTGCGGCGACGGCCTCCTCGACGTCACCCGGGGCAGCACGGACGTGACCGTGTCCAGGTGCCGCTTCTCGGCGCACGA
CAAGGCCGTGCTGATCGGCGGCAGCGCCGGCCACGTCGAGGACCGCGCCATCCGGGTGACCATCCACCACTGCCTGTTCG
ACGGCACGCGGCAGAGGCACCCGCGCGTCCGCTTCGGCAGGGTGCACCTCTACAACAACTACACCAGGGGCTGGGGCATT
TACGCTGTCTGCGCCAGCGTCGAGTCACAGATTGTATCCCAGTGCAACATTTACGAGGCAGGGGAGAAGAAGAAAGTCTT
CAAGTACATGACAGAACAGGCGGCAGACAGAGACCAGAGTTCAACTGGGTTCATCCGGTCTGAAGGCGACCTGTTCCTGA
ACGGTGCTGAGGAGTGCGCTGCTCATGATTCAGAAGCAGCGGCAGATGAGTTGTGGGACTTCAAGATTCAGGAATTGGAT
TTCTACCAGTCTTGTTCGGTTCAACCAGCGTCAATGGCGCTCAAGAAGCTACTTGAGTGCTTCACTGGCTGGCAGCCAGT
TCCGCTGCCGGAAGACACCTGCCTCGAAGAGGAAACTGATTCTGCTCCTGCTGACACTACCGCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA004758 | ortholog_one2one | 1 retrogene | |
| Leersia perrieri | LPERR01G31380 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA01G41460 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC01G35260 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0303100 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0837100 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_omer_1 | 69.82 | 77.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OMERI01G33590 retrocopies