Parental gene: | OMERI02G30980, OMERI02G30980 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza meridionalis |
| Coordinates: | 2:32532492..32536063(+) |
>OMERI02G30980
ATGACCTCGCTGTCGTCCTCCGCCGCCGCGGCGCGCGCCACCTTCGTCATGCCGTCGTCGGTGCGTGGGGGCATGGGCGG
AAGGAGGATGGCGAGGCTGGTGACGCGCGCGGCGGCGTCGAGCCCGAAGCTCCCGAGCGGGCGGCGGCTGCGGGTGGCGG
TGGTCGGGGGCGGACCCGCGGGCGGCGCGGCGGCGGAGGCGCTGGCCAAGGGCGGCGTGGAGACGGTGCTCATCGAGCGG
AAGCTGGACAACTGCAAGCCCTGCGGCGGGGCCATCCCGCTGTGCATGGTGTCGGAGTTCGACCTGCCGCTGGACCTCGT
CGACAGGAAGGTGAGGAAGATGAAGATGATTTCGCCGTCCAACGTCGCCGTCGACATCGGCGGCACGCTCGCGCCGCACG
AGTACATCGGGATGGTCCGCCGCGAGGTGCTCGACGCCTACCTCCGCTCCCGCGCCGAGGGGGCCGGCGCCGAGGTCGTC
AATGGCCTCTTCCTTAGGTATGAGGCGCCCAAGGAACCCAACGGGTCGTACGTGGTGCACTACAACCACTACGACAGCTC
CAACGGCAAGGCCGGCGGCGAGAAGCGGACGTTCGAGGTGGACGCGATCGTGGGCGCGGACGGCGCCAACTCCCGCGTCG
CCAAGGACATGGGCGCCGGCGACTACGAGTACGCCATCGCGTTCCAGGAGCGCGTCAAGATCCCCGACGACAAGATGAAG
TACTACGAGGAGCGCGCCGAGATGTACGTCGGCGACGACGTCTCGCCGGACTTCTACGGCTGGGTGTTCCCCAAGTGCGA
CCACGTCGCCGTCGGCACCGGCACCGTCACCCACAAGCCCGACATCAAGAAGTTCCAGGCCGCCACCCGCCTCCGCGCCA
AGGACCGGATCGAGGGCGGCAAGATCATCCGCGTCGAGGCTCACCCCATCCCCGAGCACCCGAGGCCTAAGAGGGTGGCG
GGGAGGGTGACGCTGGTGGGGGACGCGGCGGGGTACGTGACAAAGTGCTCCGGCGAGGGGATCTACTTCGCGGCGAAGAG
CGGGCGGATGTGCGCGGAGGCGATCGTGGCCGGGTCGGCGAACGGGACGCGGATGGTGGAGGAGAGCGACCTGCGCAGGT
ACCTGGCCGAGTTCGACCGCCTCTACTGGCCGACGTACAAGGTGCTCGACGTGCTCCAGAAGGTGTTCTACCGCTCCAAC
GCCGCCCGCGAGGCGTTCGTCGAGATGTGCGCCGACGACTACGTGCAGAGGATGACCTTCGACAGCTACCTCTACAAGCG
CGTCGTGCCGGGCAACCCGCTCGACGACATCAAGCTCGCCGTCAACACCATCGGCAGCCTCGTCCGCGCCACCGCCCTCC
GCCGCGAGATGGAGAAGGTCACCTTGTGA
ATGACCTCGCTGTCGTCCTCCGCCGCCGCGGCGCGCGCCACCTTCGTCATGCCGTCGTCGGTGCGTGGGGGCATGGGCGG
AAGGAGGATGGCGAGGCTGGTGACGCGCGCGGCGGCGTCGAGCCCGAAGCTCCCGAGCGGGCGGCGGCTGCGGGTGGCGG
TGGTCGGGGGCGGACCCGCGGGCGGCGCGGCGGCGGAGGCGCTGGCCAAGGGCGGCGTGGAGACGGTGCTCATCGAGCGG
AAGCTGGACAACTGCAAGCCCTGCGGCGGGGCCATCCCGCTGTGCATGGTGTCGGAGTTCGACCTGCCGCTGGACCTCGT
CGACAGGAAGGTGAGGAAGATGAAGATGATTTCGCCGTCCAACGTCGCCGTCGACATCGGCGGCACGCTCGCGCCGCACG
AGTACATCGGGATGGTCCGCCGCGAGGTGCTCGACGCCTACCTCCGCTCCCGCGCCGAGGGGGCCGGCGCCGAGGTCGTC
AATGGCCTCTTCCTTAGGTATGAGGCGCCCAAGGAACCCAACGGGTCGTACGTGGTGCACTACAACCACTACGACAGCTC
CAACGGCAAGGCCGGCGGCGAGAAGCGGACGTTCGAGGTGGACGCGATCGTGGGCGCGGACGGCGCCAACTCCCGCGTCG
CCAAGGACATGGGCGCCGGCGACTACGAGTACGCCATCGCGTTCCAGGAGCGCGTCAAGATCCCCGACGACAAGATGAAG
TACTACGAGGAGCGCGCCGAGATGTACGTCGGCGACGACGTCTCGCCGGACTTCTACGGCTGGGTGTTCCCCAAGTGCGA
CCACGTCGCCGTCGGCACCGGCACCGTCACCCACAAGCCCGACATCAAGAAGTTCCAGGCCGCCACCCGCCTCCGCGCCA
AGGACCGGATCGAGGGCGGCAAGATCATCCGCGTCGAGGCTCACCCCATCCCCGAGCACCCGAGGCCTAAGAGGGTGGCG
GGGAGGGTGACGCTGGTGGGGGACGCGGCGGGGTACGTGACAAAGTGCTCCGGCGAGGGGATCTACTTCGCGGCGAAGAG
CGGGCGGATGTGCGCGGAGGCGATCGTGGCCGGGTCGGCGAACGGGACGCGGATGGTGGAGGAGAGCGACCTGCGCAGGT
ACCTGGCCGAGTTCGACCGCCTCTACTGGCCGACGTACAAGGTGCTCGACGTGCTCCAGAAGGTGTTCTACCGCTCCAAC
GCCGCCCGCGAGGCGTTCGTCGAGATGTGCGCCGACGACTACGTGCAGAGGATGACCTTCGACAGCTACCTCTACAAGCG
CGTCGTGCCGGGCAACCCGCTCGACGACATCAAGCTCGCCGTCAACACCATCGGCAGCCTCGTCCGCGCCACCGCCCTCC
GCCGCGAGATGGAGAAGGTCACCTTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI3G59430 | ortholog_one2one | 1 retrogene | |
| Zea mays | GRMZM2G105644 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA06G04710 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC02G29860 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI02G34000 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0744900 | ortholog_one2one | 1 retrogene | |
| Sorghum bicolor | Sb04g028050 | ortholog_one2one | 1 retrogene | |
| Triticum aestivum | Traes_6DL_0FF72D765 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_omer_17 | 57.64 | 93.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OMERI02G30980 retrocopies