Parental gene: | OPUNC02G29860 |
| Aliases: | None |
| Description: | None |
| Organism: | Red rice (Oryza punctata) |
| Coordinates: | 2:34725699..34728771(+) |
>OPUNC02G29860
ATGACCTCACTGTCGTCCTCCGCCACCGCGGCGCGCGCCACCTTCGTCATGCCGTCGTCGGTACGTGGGGGCAGCGGCAG
GAGGATGGCGAGGCTGGTGACGCGCGCGGCGGCGTCGAGCCCGAAGCTCCCGAGCGGGAGGCGGCTGCGGGTGGCGGTGG
TCGGGGGTGGACCCGCGGGCGGCGCGGCGGCGGAGGCGCTGGCCAAGGGCGGGGTGGAGACGGTGCTCATCGAGCGGAAG
CTGGACAACTGCAAGCCCTGCGGCGGGGCCATCCCGCTGTGCATGGTGTCGGAGTTCGACCTGCCGCTCGACCTCGTCGA
CAGGAAGGTGAGGAAGATGAAGATGATTTCGCCGTCCAACGTCGCCGTCGACATCGGCGGCACGCTCGCGCCGCACGAGT
ACATCGGGATGGTCCGCCGCGAGGTGCTCGACGCGTACCTCCGCTCCCGCGCCGAGGGGGCCGGCGCGGAGGTCGTCAAT
GGCCTCTTCCTGAGGTATGAGGCGCCCAAGGAACCCAACGGGTCGTACGTGGTGCACTACAACCACTACGACAGCTCCAA
CGGCAAGGCCGGCGGCGAGAAGCGGACGTTCGAGGTGGACGCCATCGTGGGCGCGGACGGCGCCAACTCCCGCGTCGCCA
AGGACATGGGCGCCGGCGACTACGAGTACGCCATCGCGTTCCAGGAGCGCGTCAAGATCCCCGACGACAAGATGAAGTAC
TACGAGGAGCGCGCCGAGATGTACGTCGGCGACGACGTCTCGCCGGACTTCTACGGCTGGGTCTTCCCCAAGTGCGACCA
CGTCGCCGTCGGCACCGGCACCGTCACCCACAAGCCCGACATCAAGAAATTCCAGGCCGCCACCCGTCTCCGCGCCAAGG
ACAGGATCGAGGGCGGCAAGATCATCCGCGTCGAGGCTCACCCCATCCCCGAGCACCCCAGGCCTAAGAGGGTGGCGGGG
AGGGTGACGCTGGTGGGGGACGCGGCGGGGTACGTGACAAAGTGCTCCGGCGAGGGGATCTACTTCGCGGCGAAGAGCGG
GAGGATGTGCGCGGAGGCGATCGTGGCCGGGTCGGCGAACGGGACGCGGATGGTGGAGGAGAGCGACCTGCGCAAGTACC
TGGCCGAGTTCGACCGCCTGTACTGGCCGACGTACAAGGTGCTCGACGTGCTCCAGAAGGTGTTCTACCGCTCCAACGCC
GCCCGCGAGGCGTTCGTCGAGATGTGCGCCGACGATTACGTCCAGAGAATGACCTTCGACAGCTACCTCTACAAGCGCGT
CGTGCCGGGCAACCCGCTCGACGACATCAAGCTCGCCGTCAACACCATTGGCAGCCTCGTCCGCGCCACCGCCCTCCGCC
GCGAGATGGAGAAGGTCACCTTGTGA
ATGACCTCACTGTCGTCCTCCGCCACCGCGGCGCGCGCCACCTTCGTCATGCCGTCGTCGGTACGTGGGGGCAGCGGCAG
GAGGATGGCGAGGCTGGTGACGCGCGCGGCGGCGTCGAGCCCGAAGCTCCCGAGCGGGAGGCGGCTGCGGGTGGCGGTGG
TCGGGGGTGGACCCGCGGGCGGCGCGGCGGCGGAGGCGCTGGCCAAGGGCGGGGTGGAGACGGTGCTCATCGAGCGGAAG
CTGGACAACTGCAAGCCCTGCGGCGGGGCCATCCCGCTGTGCATGGTGTCGGAGTTCGACCTGCCGCTCGACCTCGTCGA
CAGGAAGGTGAGGAAGATGAAGATGATTTCGCCGTCCAACGTCGCCGTCGACATCGGCGGCACGCTCGCGCCGCACGAGT
ACATCGGGATGGTCCGCCGCGAGGTGCTCGACGCGTACCTCCGCTCCCGCGCCGAGGGGGCCGGCGCGGAGGTCGTCAAT
GGCCTCTTCCTGAGGTATGAGGCGCCCAAGGAACCCAACGGGTCGTACGTGGTGCACTACAACCACTACGACAGCTCCAA
CGGCAAGGCCGGCGGCGAGAAGCGGACGTTCGAGGTGGACGCCATCGTGGGCGCGGACGGCGCCAACTCCCGCGTCGCCA
AGGACATGGGCGCCGGCGACTACGAGTACGCCATCGCGTTCCAGGAGCGCGTCAAGATCCCCGACGACAAGATGAAGTAC
TACGAGGAGCGCGCCGAGATGTACGTCGGCGACGACGTCTCGCCGGACTTCTACGGCTGGGTCTTCCCCAAGTGCGACCA
CGTCGCCGTCGGCACCGGCACCGTCACCCACAAGCCCGACATCAAGAAATTCCAGGCCGCCACCCGTCTCCGCGCCAAGG
ACAGGATCGAGGGCGGCAAGATCATCCGCGTCGAGGCTCACCCCATCCCCGAGCACCCCAGGCCTAAGAGGGTGGCGGGG
AGGGTGACGCTGGTGGGGGACGCGGCGGGGTACGTGACAAAGTGCTCCGGCGAGGGGATCTACTTCGCGGCGAAGAGCGG
GAGGATGTGCGCGGAGGCGATCGTGGCCGGGTCGGCGAACGGGACGCGGATGGTGGAGGAGAGCGACCTGCGCAAGTACC
TGGCCGAGTTCGACCGCCTGTACTGGCCGACGTACAAGGTGCTCGACGTGCTCCAGAAGGTGTTCTACCGCTCCAACGCC
GCCCGCGAGGCGTTCGTCGAGATGTGCGCCGACGATTACGTCCAGAGAATGACCTTCGACAGCTACCTCTACAAGCGCGT
CGTGCCGGGCAACCCGCTCGACGACATCAAGCTCGCCGTCAACACCATTGGCAGCCTCGTCCGCGCCACCGCCCTCCGCC
GCGAGATGGAGAAGGTCACCTTGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI3G59430 | ortholog_one2one | 1 retrogene | |
| Zea mays | GRMZM2G105644 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI02G30980 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA06G04710 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI02G34000 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS02G0744900 | ortholog_one2one | 1 retrogene | |
| Sorghum bicolor | Sb04g028050 | ortholog_one2one | 1 retrogene | |
| Triticum aestivum | Traes_6DL_0FF72D765 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opun_22 | 57.22 | 79.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OPUNC02G29860 retrocopies