Parental gene: | OPUNC12G04770 |
| Aliases: | None |
| Description: | None |
| Organism: | Red rice (Oryza punctata) |
| Coordinates: | 12:4368509..4371014(+) |
>OPUNC12G04770
ATGGCGTCGGGGCAGAAGACGAGGCAGGTGGTGAAGCCAATGGAGGTGTCGGTGGAGGCCGGGAACGCCGGGGAGGCGGC
GTGGCTGGACGACGACGGGCGGCCGCGGCGGACGGGCACGTTCTGGACGGCGAGCGCGCACATCATCACCGCCGTCATCG
GCTCCGGCGTGCTGTCGCTGGCATGGGCCATCGCGCAGCTCGGCTGGGTCGCCGGCCCCGCCGTGATGCTCCTCTTCGCC
TTCGTCATCTACTACACCTCCACCCTCCTCGCCGAGTGCTACCGCACCGGCGACCCAACCACCGGCAAGCGCAACTACAC
CTACATGGACGCCGTGCGGGCCAACCTCGGCGGCGCCAAGGTCACCTTCTGCGGCGTCATCCAGTACGCCAACCTCGTCG
GCGTCGCCATCGGTTACACCATCGCGTCGTCCATCAGCATGCGCGCCATCAGGAGGGCCGGCTGCTTCCACCACAACGGC
CATGGCGACCCGTGCCGGAGCTCCAGCAACCCTTACATGATCCTCTTCGGCGTCGTGCAGATCGTCTTCTCGCAGATCCC
TGACTTCGACCAGATTTGGTGGCTGTCCATCGTCGCCGCCGTCATGTCCTTCACCTACTCCGGCATCGGCCTCTCCCTCG
GCATCGTCCAGACAATCTCCAATGGCGGGATCCAGGGCAGCCTCACCGGCATCAGCATCGGCGTCGGCGTCAGCTCGACG
CAGAAAGTGTGGCGCAGCCTGCAGGCATTCGGCGACATCGCCTTCGCGTACTCCTTCTCCAACATCCTCATCGAGATCCA
AGACACGATCAAGGCACCGCCGCCGTCGGAGGCGAAGGTGATGAAGAACGCGACGAGGCTGAGCGTGGCGACGACGACGG
TGTTCTACATGCTGTGCGGGTGCATGGGCTACGCGGCGTTCGGCGACGCGGCGCCGGACAACCTCCTCACGGGCTTCGGA
TTCTACGAGCCCTTCTGGCTGCTCGACGTCGCCAACGTCGCCATCGTCGTGCACCTCGTCGGCGCCTACCAGGTGTTCGT
CCAGCCCATCTTCGCCTTCGTCGAGCGCTGGGCGTCCCGCCGGTGGCCGGACAGCGCGTTCATCGCCAAGGAGCTCAGCG
TGGGGCCCTTCGCGCTCAGCCTCTTCCGGCTGACATGGCGGTCGGCGTTCGTCTGCCTCACCACCGTCGTCGCCATGCTC
CTCCCCTTCTTCGGCAACGTGGTGGGTCTCCTCGGCGCCGTCTCCTTCTGGCCGCTCACCGTCTACTTCCCCGTCGAGAT
GTACATCGCGCAGCGCGGCGTGCCACGTGGCAGCGCGAGGTGGATCTCACTCAAGACGCTCAGCGCGTGCTGCCTCGTCG
TCTCCATCGCCGCAGCCGCGGGCTCCATTGCTGACGTCATCGACGCGCTCAAGGTGTACCGGCCGTTCAGCGGATGA
ATGGCGTCGGGGCAGAAGACGAGGCAGGTGGTGAAGCCAATGGAGGTGTCGGTGGAGGCCGGGAACGCCGGGGAGGCGGC
GTGGCTGGACGACGACGGGCGGCCGCGGCGGACGGGCACGTTCTGGACGGCGAGCGCGCACATCATCACCGCCGTCATCG
GCTCCGGCGTGCTGTCGCTGGCATGGGCCATCGCGCAGCTCGGCTGGGTCGCCGGCCCCGCCGTGATGCTCCTCTTCGCC
TTCGTCATCTACTACACCTCCACCCTCCTCGCCGAGTGCTACCGCACCGGCGACCCAACCACCGGCAAGCGCAACTACAC
CTACATGGACGCCGTGCGGGCCAACCTCGGCGGCGCCAAGGTCACCTTCTGCGGCGTCATCCAGTACGCCAACCTCGTCG
GCGTCGCCATCGGTTACACCATCGCGTCGTCCATCAGCATGCGCGCCATCAGGAGGGCCGGCTGCTTCCACCACAACGGC
CATGGCGACCCGTGCCGGAGCTCCAGCAACCCTTACATGATCCTCTTCGGCGTCGTGCAGATCGTCTTCTCGCAGATCCC
TGACTTCGACCAGATTTGGTGGCTGTCCATCGTCGCCGCCGTCATGTCCTTCACCTACTCCGGCATCGGCCTCTCCCTCG
GCATCGTCCAGACAATCTCCAATGGCGGGATCCAGGGCAGCCTCACCGGCATCAGCATCGGCGTCGGCGTCAGCTCGACG
CAGAAAGTGTGGCGCAGCCTGCAGGCATTCGGCGACATCGCCTTCGCGTACTCCTTCTCCAACATCCTCATCGAGATCCA
AGACACGATCAAGGCACCGCCGCCGTCGGAGGCGAAGGTGATGAAGAACGCGACGAGGCTGAGCGTGGCGACGACGACGG
TGTTCTACATGCTGTGCGGGTGCATGGGCTACGCGGCGTTCGGCGACGCGGCGCCGGACAACCTCCTCACGGGCTTCGGA
TTCTACGAGCCCTTCTGGCTGCTCGACGTCGCCAACGTCGCCATCGTCGTGCACCTCGTCGGCGCCTACCAGGTGTTCGT
CCAGCCCATCTTCGCCTTCGTCGAGCGCTGGGCGTCCCGCCGGTGGCCGGACAGCGCGTTCATCGCCAAGGAGCTCAGCG
TGGGGCCCTTCGCGCTCAGCCTCTTCCGGCTGACATGGCGGTCGGCGTTCGTCTGCCTCACCACCGTCGTCGCCATGCTC
CTCCCCTTCTTCGGCAACGTGGTGGGTCTCCTCGGCGCCGTCTCCTTCTGGCCGCTCACCGTCTACTTCCCCGTCGAGAT
GTACATCGCGCAGCGCGGCGTGCCACGTGGCAGCGCGAGGTGGATCTCACTCAAGACGCTCAGCGCGTGCTGCCTCGTCG
TCTCCATCGCCGCAGCCGCGGGCTCCATTGCTGACGTCATCGACGCGCTCAAGGTGTACCGGCCGTTCAGCGGATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA037101 | ortholog_many2many | 1 retrogene | |
| Oryza brachyantha | OB12G14670 | ortholog_many2many | 1 retrogene | |
| Oryza glumaepatula | OGLUM12G05640 | ortholog_many2many | 1 retrogene | |
| Oryza nivara | ONIVA12G04480 | ortholog_many2many | 1 retrogene | |
| Triticum aestivum | Traes_5DL_BB10A3B4B | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opun_43 | 71.79 | 97.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OPUNC12G04770 retrocopies