Parental gene:

ORGLA05G0012000

Aliases:None
Description:None
Organism:African rice (Oryza glaberrima)
Coordinates:5:775836..778151(-)


>ORGLA05G0012000
ATGGCGTCCGTGGATCTGACCCCGAGGCAGGCGAGGAAGGCGTACGGCGGCGATGGTGGGACCTACTACGAGTGGAGCCC
CGCCGACCTGCCCATGCTGGAACTCGCCAACATCGGCGGCGCCAAGCTGTCGCTCAACGCCGGTGGCCTCGCCCTGCCCA
GCTTCTCCGACTCCGGCAAAGTCGCGTATGTTCTTCAAGGCAAGGGCACTTGCGGCATTGTCCTGCCGGAGGCGAGCAAG
GAGAAGGTGATCGCCGTGAAGGAGGGAGACTCCCTGGCACTCCCCTTTGGCGTGGTGACATGGTGGCATAACCTCCCGGA
GTCCCCAATCGAGCTCGTCATCCTCTTCCTCGGCGACACATCGAAGGCGCACAAGGCCGGCCAATTTACAAACATGCAGC
TCACCGGTGCCACCGGCATCTTCACCGGCTTCTCCACGGAGTTCGTCGGCCGCGCATGGGACCTCGCCGAGTCCGACGCC
GTCAAGCTCGTGTCCAGCCAGCCCGCCTCCGGCATCGTCAAGATCAAGTCCGGCCAGAAGCTCCCCGAGCCGTCGGCCGC
CGATCGCGAGGGCATGGCGCTCAACTGCCTGGAGGCGCCGCTCGACGTGGACATCAAGAACGGCGGCCGCGTGGTGGTGC
TCAACACGGCGAACCTGCCGATGGTGAAGGAGGTCGGGCTCGGCGCCGACCTGGTGAGGATCGACGGCCACTCCATGTGC
TCGCCGGGGTTCTCGTGCGACTCGGCGTACCAGGTCACCTACTTCATCCGCGGCAGCGGCCGCGTCCAGGTGGTCGGCGC
CGACGGGAAGCGCGTGCTGGACACCCACGTCGAGGGCGGCAACCTGTTCATCGTGCCGCGCTTCTGCGTCGTCTCCAAGA
TCGCCGACGCCTCCGGCCTGCAGTGGTTCTCCATTATCACCGCACCAAACCCGATCTTCAGCCACCTGGCGGGGAAGACG
TCGGTGTGGAAGGCGATCTCGCCGGAGGTGCTGGAGGCGTCGTTCAACGCGACGCCGGAGATGGAGAAGCTGTTCCGGTC
CAAAAGGCTCGACTCGGAGATCTTCTTCGCGCCCAACTGA

Species Parental gene accession Homology type Retrogenes number
Oryza brachyantha OB05G11140 ortholog_one2one 1 retrogene
retro_obra_13,
Oryza glumaepatula OGLUM05G01170 ortholog_one2one 1 retrogene
retro_oglu_9,
Oryza nivara ONIVA05G01190 ortholog_one2one 1 retrogene
retro_oniv_21,
Oryza punctata OPUNC05G01050 ortholog_one2one 1 retrogene
retro_opun_21,
Oryza rufipogon ORUFI05G01180 ortholog_one2one 1 retrogene
retro_oruf_6,
Oryza sativa japonica OS05G0116000 ortholog_one2one 1 retrogene
retro_osat_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogla_28 76.40 99.16
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Download FASTA sequences of all ORGLA05G0012000 retrocopies