Parental gene:

ORGLA08G0109300

Aliases:None
Description:None
Organism:African rice (Oryza glaberrima)
Coordinates:8:12261567..12264151(+)


>ORGLA08G0109300
ATGGCCGGGATTGGTCCGATCAGGCAGGACTGGGAGCCGGTGGTGGTGCGGAAGAAGGCGCCCACCGCCGCCGCCAAGAA
GGATGAGAAGGCCGTCAACGCCGCCCGCCGCTCCGGCGCCGAGATCGAGACCATGAAGAAGTATAACGCTGGAACAAACA
AGGCGGCGTCCAGTGGCACATCCCTCAACACCAAGCGGCTGGATGACGACACCGAGAGCCTTGCCCATGAGCGTGTCTCA
AGTGACCTGAAGAAAAACCTCATGCAAGCAAGGCTGGACAAGAAGATGACCCAGGCACAGCTTGCACAGATGATCAATGA
GAAGCCCCAGGTGATCCAGGAGTACGAGTCAGGTAAAGCTATTCCGAACCAGCAGATCATCGGGAAGCTTGAAAGGGCTC
TTGGAACAAAGCTGCGCGGCAAGAAATAA

Species Parental gene accession Homology type Retrogenes number
Medicago truncatula MTR_2g084220 ortholog_one2many 1 retrogene
Oryza brachyantha OB08G20790 ortholog_one2one 1 retrogene
Oryza barthii OBART08G12410 ortholog_one2one 1 retrogene
Oryza glumaepatula OGLUM08G13370 ortholog_one2one 1 retrogene
Oryza meridionalis OMERI08G10430 ortholog_one2one 1 retrogene
Oryza nivara ONIVA08G13070 ortholog_one2one 1 retrogene
Oryza punctata OPUNC08G11340 ortholog_one2one 1 retrogene
Oryza rufipogon ORUFI08G14100 ortholog_one2one 1 retrogene
Oryza sativa japonica OS08G0366100 ortholog_one2one 1 retrogene
Populus trichocarpa POPTR_0001s40090 ortholog_one2many 1 retrogene
Physcomitrella patens PP1S96_94V6 ortholog_one2many 1 retrogene
Prunus persica PRUPE_ppa013074mg ortholog_one2one 1 retrogene
Sorghum bicolor Sb07g014940 ortholog_one2one 1 retrogene
Arabidopsis lyrata scaffold_503053.1 ortholog_one2many 1 retrogene
Solanum lycopersicum Solyc10g007350.2 ortholog_one2many 1 retrogene
Theobroma cacao TCM_001730 ortholog_one2many 1 retrogene
Vitis vinifera VIT_12s0028g02020 ortholog_one2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogla_35 51.09 96.48
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Download FASTA sequences of all ORGLA08G0109300 retrocopies