Parental gene: | OS06G0636600 |
| Aliases: | None |
| Description: | None |
| Organism: | Rice subsp. japonica (Oryza sativa japonica) |
| Coordinates: | 6:25867746..25870244(+) |
>OS06G0636600
ATGCTTTCTTGCTTCCGGCTGCCGCGGCCGCCGGGCGGGGAGACGAACCAGGCGGCGGCGGCGTCGGCGTCGCCGAGGCG
GCCGTCGCTGCCGTTCGCGTCGAGCCTGTTCGCGGGGTCGCCGTCGACGTCGGGGAAGCAGCCGTGGCTGGCGGACGCGG
ACGACATGGAGAAGAAGCGGTGGGACAGCATGGAGTCGTGGTCGATGCTGCTGGACACGGCCATGGGGCCCTCCGGCGAG
CCGACGTCGAGCCGCGACAGCGGGCGGCGGGAGGAGTGGATGGCCGACCTCTCCCACCTCTTCATCGGCAACAAGTTCGC
CTCCGGCGCCAACAGCCGCATCTACCGCGGCATCTACAAGCAGCGCGCCGTCGCCGTCAAGATGGTCCGCATCCCCGAGC
GCGACGAGGCCCGCCGCGCCGTCCTCGAGGACCAGTTCAACTCCGAGGTCGCCTTCCTCTCCCGCCTCTACCACCCCAAC
ATCGTCCAGTTCATCGCGGCGTGCAAGAAGCCGCCGGTGTACTGCATCATCACGGAGTACATGTCGCAGGGGACGCTGAG
GATGTACCTGAACAAGAAGGACCCATACTCGCTGTCGTCGGAGACGATACTGAAGCTGGCGCTGGACATCTCGCGGGGGA
TGGAGTACCTGCACGCGCAGGGGGTGATCCACCGGGACCTCAAGTCGCAGAACCTCCTCCTCAACGACGAGATGCGCGTC
AAGGTCGCCGACTTCGGCACGTCCTGCCTGGAGACGGCGTGCCAGGCCACCAAGGGCAACAAGGGCACCTACCGATGGAT
GGCGCCGGAGATGACCAAGGAGAAGCCCTACACCCGCAAGGTCGACGTCTACAGCTTCGGCATCGTCCTCTGGGAGCTCA
CCACCTGCCTCCTCCCCTTCCAGGGCATGACCCCCGTCCAAGCCGCCTACGCCGCCTCCGAGAAGAATCTGCGGCCGCCG
TTGTCGACCTCGTGCTCTCCGGTGCTGAACAACCTGATCAAGAGGTGCTGGTCGGCGAACCCGGCGAGGCGGCCGGAGTT
CAGCTACATCGTGTCGGTGCTGGAGAAGTACGACCACTGCGTGAAGGAAGGGATGCCGATCATGGCGCACCAGGAGCTCA
GGATCTGGAGCTCCTTCGCCAAGATCTTCAGGATGGGCTGCATCACCAACAACTTGTCCATACCGGTGCATGCTTGA
ATGCTTTCTTGCTTCCGGCTGCCGCGGCCGCCGGGCGGGGAGACGAACCAGGCGGCGGCGGCGTCGGCGTCGCCGAGGCG
GCCGTCGCTGCCGTTCGCGTCGAGCCTGTTCGCGGGGTCGCCGTCGACGTCGGGGAAGCAGCCGTGGCTGGCGGACGCGG
ACGACATGGAGAAGAAGCGGTGGGACAGCATGGAGTCGTGGTCGATGCTGCTGGACACGGCCATGGGGCCCTCCGGCGAG
CCGACGTCGAGCCGCGACAGCGGGCGGCGGGAGGAGTGGATGGCCGACCTCTCCCACCTCTTCATCGGCAACAAGTTCGC
CTCCGGCGCCAACAGCCGCATCTACCGCGGCATCTACAAGCAGCGCGCCGTCGCCGTCAAGATGGTCCGCATCCCCGAGC
GCGACGAGGCCCGCCGCGCCGTCCTCGAGGACCAGTTCAACTCCGAGGTCGCCTTCCTCTCCCGCCTCTACCACCCCAAC
ATCGTCCAGTTCATCGCGGCGTGCAAGAAGCCGCCGGTGTACTGCATCATCACGGAGTACATGTCGCAGGGGACGCTGAG
GATGTACCTGAACAAGAAGGACCCATACTCGCTGTCGTCGGAGACGATACTGAAGCTGGCGCTGGACATCTCGCGGGGGA
TGGAGTACCTGCACGCGCAGGGGGTGATCCACCGGGACCTCAAGTCGCAGAACCTCCTCCTCAACGACGAGATGCGCGTC
AAGGTCGCCGACTTCGGCACGTCCTGCCTGGAGACGGCGTGCCAGGCCACCAAGGGCAACAAGGGCACCTACCGATGGAT
GGCGCCGGAGATGACCAAGGAGAAGCCCTACACCCGCAAGGTCGACGTCTACAGCTTCGGCATCGTCCTCTGGGAGCTCA
CCACCTGCCTCCTCCCCTTCCAGGGCATGACCCCCGTCCAAGCCGCCTACGCCGCCTCCGAGAAGAATCTGCGGCCGCCG
TTGTCGACCTCGTGCTCTCCGGTGCTGAACAACCTGATCAAGAGGTGCTGGTCGGCGAACCCGGCGAGGCGGCCGGAGTT
CAGCTACATCGTGTCGGTGCTGGAGAAGTACGACCACTGCGTGAAGGAAGGGATGCCGATCATGGCGCACCAGGAGCTCA
GGATCTGGAGCTCCTTCGCCAAGATCTTCAGGATGGGCTGCATCACCAACAACTTGTCCATACCGGTGCATGCTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA023324 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM06G23210 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI06G22050 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA06G26030 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA06G0183600 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI06G23740 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS03G0638800 | within_species_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_osat_5 | 56.33 | 73.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OS06G0636600 retrocopies