Parental gene:

PGSC0003DMG400007336

Aliases:None
Description:40S ribosomal protein S15 [Source:PGSC_GENE;Acc:PGSC0003DMG400007336]
Organism:Potato (Solanum tuberosum)
Coordinates:2:37675876..37678530(-)


>PGSC0003DMG400007336
ATGGCGGAAGTTGAAGCTGATGTTGCTACCGGACAGCCAAGGAAGAGAACGTTCAAGAAGTTCAGCTACAGAGGAGTAGA
TCTGGATTCTCTTCTTGACATGTCTACTGACGAGCTTGTTAAGCTTTTCCCTGCGCGTCCTCGCAGAAGGTTCCAGAGGG
GTTTGAAGAGGAAGCCTATGGCTTTGATCAAGAAGCTCCGCAAGGCGAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAG
GTTGTGAGAACACATTTGAGGAACATGATCATTGTTCCTGAGATGATTGGAAGTGTTATTGGAATCTACAATGGAAAAAC
TTTCAATCAAATTGAGGTCAAGCCTGAGATGATTAGTCACTACTTAGCTGAGTTCTCCATCTCATACAAGCCTGTTAAGC
ACGGTAGGCCCGGTATTGGTGCTACTCACTCTTCAAGGTTCATTCCATTGAAGTGA

Species Parental gene accession Homology type Retrogenes number
Arabidopsis thaliana AT1G04270 ortholog_many2many 1 retrogene
retro_atha_20,
Brassica oleracea Bo5g004420 ortholog_many2many 1 retrogene
retro_bole_33,
Brassica rapa Bra032519 ortholog_many2many 1 retrogene
retro_brap_20,
Arabidopsis lyrata fgenesh2_kg.1__358__AT1G04270.1 ortholog_many2many 1 retrogene
retro_alyr_8,
Medicago truncatula MTR_1g070450 ortholog_many2many 1 retrogene
retro_mtru_46,
Solanum lycopersicum Solyc02g082000.2 ortholog_one2one 1 retrogene
retro_slyc_75,
Triticum aestivum Traes_2AL_52D3F9AF41 ortholog_many2many 1 retrogene
retro_taes_67,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_stub_80 82.65 64.24
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Download FASTA sequences of all PGSC0003DMG400007336 retrocopies