Parental gene:

RPS15, fgenesh2_kg.1__358__AT1G04270.1

Aliases:None
Description:None
Organism:Lyre-leaved rock-cress (Arabidopsis lyrata)
Coordinates:1:1378391..1379738(-)


>fgenesh2_kg.1__358__AT1G04270.1
ATGGCGGATGTTGAACCAGAGGTTGCTGCAGCTGGAGTGCCAAAGAAGAGGACGTTTAAGAAGTTTGCCTTCAGAGGAGT
AGATCTCGATGCTCTTCTTGACATGTCTACTGATGATCTTGTCAAGCTCTTCTCTTCTCGTATTCGCAGAAGGTTCTCTA
GAGGTTTGACGAGGAAGCCAATGGCTCTGATTAAGAAGCTGAGGAAAGCGAAAAGGGAGGCACCACAAGGTGAGAAGCCA
GAGCCTGTGAGAACCCACTTGAGGAACATGGTCATTGTCCCTGAGATGATTGGAAGCATCATTGGAGTTTACAATGGTAA
GACTTTCAACCAAGTCGAGATCAAGCCTGAGATGATTGGTCACTACCTGGCTGAGTTCTCTATCTCATACAAGCCGGTCA
AGCACGGTAGGCCTGGTGTTGGTGCTACCCACTCTTCCAGATTCATTCCCCTCAAGTGA

Species Parental gene accession Homology type Retrogenes number
Arabidopsis thaliana AT1G04270 ortholog_one2one 1 retrogene
retro_atha_20,
Brassica oleracea Bo5g004420 ortholog_one2many 1 retrogene
retro_bole_33,
Brassica rapa Bra032519 ortholog_one2many 1 retrogene
retro_brap_20,
Medicago truncatula MTR_1g070450 ortholog_many2many 1 retrogene
retro_mtru_46,
Solanum tuberosum PGSC0003DMG400007336 ortholog_many2many 1 retrogene
retro_stub_80,
Solanum lycopersicum Solyc02g082000.2 ortholog_many2many 1 retrogene
retro_slyc_75,
Triticum aestivum Traes_2AL_52D3F9AF41 ortholog_many2many 1 retrogene
retro_taes_67,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_alyr_8 63.33 94.74
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Download FASTA sequences of all fgenesh2_kg.1__358__AT1G04270.1 retrocopies