Parental gene: | PRUPE_ppa001948mg |
| Aliases: | None |
| Description: | cullin 1 [Source:Projected from Arabidopsis thaliana (AT4G02570) TAIR;Acc:AT4G02570] |
| Organism: | Peach (Prunus persica) |
| Coordinates: | scaffold_8:21065521..21072266(-) |
>PRUPE_ppa001948mg
ATGGAACGGAAAATTATTGAGTTGGATCAAGGATGGGACTATATGCAGAAGGGGATCACGAAGCTAAAGAAGATCCTAGA
GGGAATACCGGAGCCTCAGTTCAACTCAGAGGAATATATGATGCTTTACACAACTATCTACAACATGTGTACCCAAAAGC
CCCCGAACGATTATTCTCAGCAGCTTTATGACAAATATCGAGAGGCATTTGAGGAATACATTACTTCAACGGTGTTGCCC
TCTCTAAGAGAGAAGCATGATGAGTTTATGCTGCGGGAGCTTGTTAAAAGATGGGCTAATCATAAAGTTATGGTTAGGTG
GCTGTCACGTTTCTTTCATTATCTCGATCGCTACTTCATTGCAAGAAGGTCACTTCCTGCTCTAAATGAAGTTGGACTCA
CCTGCTTCCGTGATTTGGTTTATCGTGAGGTCAATGCTAATGCCAGAGTTGCTGTTATTGGTCTTATTGATAAAGAACGT
GAGGGAGAGCAGATTGATAGAGCACTGTTGAAGAATGTGATTGACATATTTGTTGAGATTGGGATGGGACACATGGATGC
TTATGAAGGGGACTTTGAAGCATACATGCTAGGAGATAGTGGTGAATACTATTCTCGTAAAGCATCAAATTGGATTTTGG
AGGATTCTTGTCCCGATTACATGCTGAAGGCAGAGGAATGCTTGAAAAGGGAGAAGGAAAGAGTTTCTCATTACCTTCAT
TCAAGTAGTGAGCAGAAGCTGGTGGAGAAAGTGCAACATGAGTTGTTGGTGGTTTATGCAACTCAACTGCTTGATAAGGA
GCATTCTGGATGTCGTGCTTTGCTTAGAGATGATAAGGTGGAAGATCTTTCTAGGATATATAGACTATACAACAAAATAC
CTAAAGGGTTGGAACCTGTTAGTAGCGTATTCAAACAGCATGTTACTGCTGAAGGTACAGCCTTGGTCCAGCAGGCTGAA
GATGTTGCAAGTAACCAGACTTCAAGTGGAGCTGGCACACAGGAACAGGTCCTTGTCAGAAAAATAATTGAGCTGCATGA
CAAGTATATGGCATATGTCACCGATTGCTTTTTAAACCACACTCTCTTTCACAAGGCTCTGAAAGAGGCTTTTGAGGTAT
TTTGCAATAAAGCTGTTTCTGGGAGTTCAAGTGCTGAATTACTTGCTGGATTCTGTGATAATATCCTCAAGAAGGGTGGG
AGTGAGAAGTTGAGTGACGAGGCCATTGAAGAAACACTTGAGAAGGTAGTTAAGCTCCTTGCTTATATCAGTGACAAGGA
TCTTTTTGCAGAATTCTACAGAAAAAAACTTGCCCGTCGGCTACTTTTTGATCGGAGTGCCAACGAGGACCATGAAAAAA
GTATTCTGACAAAGCTTAAGCAGCAATGTGGTGGACAGTTCACCTCAAAAATGGAGGGAATGGTCACAGATTTGACATTA
GCTCGGGACAATCAGGCCAACTTTGAGGAATATCTTCACAATAACCCTGACGTAAATCCTGGGATGGACTTGACAGTCAC
TGTGCTTACAACTGGTTACTGGCCAAGTTATAAATCGTTTGATCTGAACCTTCCTGAAGAGATGGTGAAGTGTGTTGAAG
TTTTCAAGGGATTCTATGAAACAAAAACGAAGCACAGAAAACTTACATGGATTTACTCATTGGGAACTTGCAATGTTAAT
GGCAAGTTTGAACCCAAAAACATTGAACTGGTCGTGTCAACGTATCAGGCTGCTCTCCTGCTTCTCTTCAATACTGCTGA
TAAATTGAACTATTCAGAGATATTGACTCAGTTGAACCTTACCCATGATGACTTGGTTAGATTGCTTCATTCGCTGTCAT
GTGCCAAGTACAAGATCCTCATTAAGGAGCCAAATACGAAGACTATCTCTCCAACTGACAGCTTTGAATTCAACTCTAAG
TTCACAGACAGAATGAGAAGAATTAAGATTCCTCTCCCACCAGTGGATGAAAGGAAGAAGGTAATTGAAGATGTTGACAA
AGACAGGCGATACGCTATTGATGCTGCAATTGTGAGGATTATGAAGAGTAGGAAAGTTTTGGGTCATCAACAATTAGTCA
TGGAGTGTGTTGAGCAGTTGGGACGTATGTTCAAGCCTGACATCAAAGCAATTAAGAAGCGCATTGAAGATCTCATCACC
CGTGACTACCTGGAGAGGGACAAGGAAAACCCTAACATGTTCAAGTATCTTGCATGA
ATGGAACGGAAAATTATTGAGTTGGATCAAGGATGGGACTATATGCAGAAGGGGATCACGAAGCTAAAGAAGATCCTAGA
GGGAATACCGGAGCCTCAGTTCAACTCAGAGGAATATATGATGCTTTACACAACTATCTACAACATGTGTACCCAAAAGC
CCCCGAACGATTATTCTCAGCAGCTTTATGACAAATATCGAGAGGCATTTGAGGAATACATTACTTCAACGGTGTTGCCC
TCTCTAAGAGAGAAGCATGATGAGTTTATGCTGCGGGAGCTTGTTAAAAGATGGGCTAATCATAAAGTTATGGTTAGGTG
GCTGTCACGTTTCTTTCATTATCTCGATCGCTACTTCATTGCAAGAAGGTCACTTCCTGCTCTAAATGAAGTTGGACTCA
CCTGCTTCCGTGATTTGGTTTATCGTGAGGTCAATGCTAATGCCAGAGTTGCTGTTATTGGTCTTATTGATAAAGAACGT
GAGGGAGAGCAGATTGATAGAGCACTGTTGAAGAATGTGATTGACATATTTGTTGAGATTGGGATGGGACACATGGATGC
TTATGAAGGGGACTTTGAAGCATACATGCTAGGAGATAGTGGTGAATACTATTCTCGTAAAGCATCAAATTGGATTTTGG
AGGATTCTTGTCCCGATTACATGCTGAAGGCAGAGGAATGCTTGAAAAGGGAGAAGGAAAGAGTTTCTCATTACCTTCAT
TCAAGTAGTGAGCAGAAGCTGGTGGAGAAAGTGCAACATGAGTTGTTGGTGGTTTATGCAACTCAACTGCTTGATAAGGA
GCATTCTGGATGTCGTGCTTTGCTTAGAGATGATAAGGTGGAAGATCTTTCTAGGATATATAGACTATACAACAAAATAC
CTAAAGGGTTGGAACCTGTTAGTAGCGTATTCAAACAGCATGTTACTGCTGAAGGTACAGCCTTGGTCCAGCAGGCTGAA
GATGTTGCAAGTAACCAGACTTCAAGTGGAGCTGGCACACAGGAACAGGTCCTTGTCAGAAAAATAATTGAGCTGCATGA
CAAGTATATGGCATATGTCACCGATTGCTTTTTAAACCACACTCTCTTTCACAAGGCTCTGAAAGAGGCTTTTGAGGTAT
TTTGCAATAAAGCTGTTTCTGGGAGTTCAAGTGCTGAATTACTTGCTGGATTCTGTGATAATATCCTCAAGAAGGGTGGG
AGTGAGAAGTTGAGTGACGAGGCCATTGAAGAAACACTTGAGAAGGTAGTTAAGCTCCTTGCTTATATCAGTGACAAGGA
TCTTTTTGCAGAATTCTACAGAAAAAAACTTGCCCGTCGGCTACTTTTTGATCGGAGTGCCAACGAGGACCATGAAAAAA
GTATTCTGACAAAGCTTAAGCAGCAATGTGGTGGACAGTTCACCTCAAAAATGGAGGGAATGGTCACAGATTTGACATTA
GCTCGGGACAATCAGGCCAACTTTGAGGAATATCTTCACAATAACCCTGACGTAAATCCTGGGATGGACTTGACAGTCAC
TGTGCTTACAACTGGTTACTGGCCAAGTTATAAATCGTTTGATCTGAACCTTCCTGAAGAGATGGTGAAGTGTGTTGAAG
TTTTCAAGGGATTCTATGAAACAAAAACGAAGCACAGAAAACTTACATGGATTTACTCATTGGGAACTTGCAATGTTAAT
GGCAAGTTTGAACCCAAAAACATTGAACTGGTCGTGTCAACGTATCAGGCTGCTCTCCTGCTTCTCTTCAATACTGCTGA
TAAATTGAACTATTCAGAGATATTGACTCAGTTGAACCTTACCCATGATGACTTGGTTAGATTGCTTCATTCGCTGTCAT
GTGCCAAGTACAAGATCCTCATTAAGGAGCCAAATACGAAGACTATCTCTCCAACTGACAGCTTTGAATTCAACTCTAAG
TTCACAGACAGAATGAGAAGAATTAAGATTCCTCTCCCACCAGTGGATGAAAGGAAGAAGGTAATTGAAGATGTTGACAA
AGACAGGCGATACGCTATTGATGCTGCAATTGTGAGGATTATGAAGAGTAGGAAAGTTTTGGGTCATCAACAATTAGTCA
TGGAGTGTGTTGAGCAGTTGGGACGTATGTTCAAGCCTGACATCAAAGCAATTAAGAAGCGCATTGAAGATCTCATCACC
CGTGACTACCTGGAGAGGGACAAGGAAAACCCTAACATGTTCAAGTATCTTGCATGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brassica oleracea | Bo01031s010 | ortholog_many2many | 1 retrogene | |
| Theobroma cacao | TCM_004565 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pper_19 | 80.79 | 58.40 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all PRUPE_ppa001948mg retrocopies