Parental gene:

TCM_004565

Aliases:None
Description:Cullin 1
Organism:Cacao (Theobroma cacao)
Coordinates:1:32301347..32308197(-)


>TCM_004565
ATGGAGCGCAAGACTATTGACTTAGATCAGGGATGGGATTATATGCAAAAGGGGATCACAAAGCTTAAGAGGATTTTGGA
AGGTTTGCCAGAGCCGCCATTTAGCTCAGAAGAATATATGATGCTTTACACGACTATCTACAACATGTGTACTCAAAAGC
CACCTCATGATTATTCTCAACAGCTTTATGACAAGTACCGAGAGGCATTTGAAGAATATATTACTTCAACGGTGTTGCCA
TCTTTAAGGGAGAGGCATGATGAGTTCATGCTGAGGGAGCTTGTTAAAAGATGGGCGAACCATAAAATAATGGTTAGGTG
GCTATCACGCTTCTTCCACTACCTTGACCGCTACTTCATTGCCCGTAGGTCACTTCCTGCTCTTAATGAAGTTGGGCTGA
CCTGCTTCCGTGATCTGGTATATAATGATGTGCATGTCAAAGTCAGAGATGCTGTAATTACCCTTATTGATAAAGAACGT
GAGGGAGAGCAGATAGACCGAGCATTATTGAAGAATGTGTTAGATATTTTTGTTGAGATTGGCATGGGACTAATGGATCG
TTATGAAGAAGATTTTGAAGCACACATGCTTCAGGATACTGGTGCTTACTATTCACGGAAGGCATCAAACTGGATTCTGG
AAGATTCTTGTCCAGATTACATGTTAAAGTCTGAAGAGTGCTTGAAGAAGGAAAGGGACAGAGTGTCTCATTACCTGCAT
TCAAGCAGTGAGACAAAATTGTCTGAGAAAGTGCAACATGAGTTGTTGGTCATGCATGCTAATCAGTTACTTGATAAGGA
GCATTCTGGATGCAGGGCCTTGCTTAGAGATGACAAGGTGGAGGATCTTTCTAGGATGTACAGGCTTTATTGTAAAATAC
CTCGAGGCTTGGATCCTGTTGCTAATATATTCAAGCAGCATATTACTGCTGAGGGTACAGCCTTGGTTCAACAGGCAGAA
GATGCTGCAAGTAACCAGGCCTCAAATGCTGCAGGTGTGCAGGAACAGGTCCTTATCAGGAAAATAATTGAGCTGCACGA
CAAGTATATGACGTATGTGACTGATTGTTTTCAAAACCATACTCTGTTCCACAAGGCCTTGAAAGAGGCTTTTGAGGTAT
TTTGCAACAAAACTGTTGCTGGCAGCTCAAGTGCAGAGCTTTTGGCAACTTTCTGTGATAATATCCTCAAGAAGGGTGGA
AGTGAGAAATTAAGTGATGAAGCCATTGAAGAAACACTTGAGAAGGTAGTTAAGCTGCTTGCCTATATTAGTGATAAAGA
CCTCTTTGCTGAATTCTACAGGAAGAAGCTTGCTCGGCGACTGCTTTTTGACCGAAGTGCTAATGACGATCACGAAAGGA
GTATTCTGACTAAGCTAAAGCAGCAATGTGGTGGACAGTTCACTTCGAAGATGGAGGGCATGGTCACAGATTTGACTTTG
GCAAGGGAAAACCAGGCCAGCTTTGAGGACTATCTTAGAAGTAACTCAGCTGCACATCCTGGGATTGATTTAACAGTTAC
TGTTCTTACCACAGGATTCTGGCCAAGTTATAAATCATTTGATCTCAATCTCCCTGCTGAGATGGTCAAGTGTGTAGAAG
TTTTCAAAGGATTTTATGAAACAAAAACAAAACACAGAAAGCTTACATGGATATACTCATTGGGAACTTGCCACATTAAT
GGCAAGTTTGAGCAGAAAACTATTGAACTCATTGTCTCAACTTATCAGGCTGCTGTCCTTCTGCTCTTTAATGCTTCTGA
TCGGCTGAGCTATTCAGAGATCATGGCTCAGTTGAACTTGACCCATGATGACTTGGTCAGATTACTACATTCGCTGTCAT
GTGCCAAGTATAAGATTCTAAGTAAAGAGCCGAACACAAAAACCATCTCCCAAAGTGACTACTTTGAGTTCAACTCTAAG
TTTACTGACAAGCTGAGGAGGATAAAGATTCCTCTCCCTCCGGTGGATGAAAGGAAGAAAGTTGTGGAAGATGTTGATAA
AGACCGGCGTTATGCTATTGATGCTGCAATTGTGCGCATAATGAAGAGTCGGAAAGTTTTGGGCCACCAACAGTTAGTTT
CAGAGTGCGTTGAGCAGTTGAGTCGCATGTTCAAGCCTGATATTAAAGCCATCAAGAAGCGGATGGAAGATCTCATCACA
CGAGACTATCTGGAGAGAGACAAGGATAATGCAAACATGTTTAGGTACTTGGCCTAA

Species Parental gene accession Homology type Retrogenes number
Brassica oleracea Bo01031s010 ortholog_many2many 1 retrogene
Prunus persica PRUPE_ppa001948mg ortholog_many2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tcac_22 88.09 100.00
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Download FASTA sequences of all TCM_004565 retrocopies