Parental gene: | Si001573m.g |
| Aliases: | None |
| Description: | None |
| Organism: | Foxtail millet (Setaria italica) |
| Coordinates: | 5:43164794..43167456(+) |
>Si001573m.g
ATGGTGTCCCAAGCACAGCAAGAGCCAGCTCTGCCTCACAGCAGCAGCACCGCCAAGCGCGCAGCCGCGTCACTCATGGA
CGCCCGCCCGGCCCAGCCTCTCCTCCTCCGCGCCCCGACTCCCAGCATTGACCTCCCCGCGTCCAAGCCGGACAGGGCCG
CCGCGGCGGCCGGCAAGGCCGCCGCCGCCTCCGTGTTCGACCTGCGGCGGGAGCCCAAGATCCCGGCGCCATTCGTGTGG
CCGCACGACGACGCGCGGCCGGCGTCGGCGGCGGAGCTGGACGTGCCGTTGGTGGACGTGGGCGTGCTGCGCAATGGCGA
CCGCGCGGGGCTGCGGCGCGCTGCGGCGCAGGTGGCCGCGGCGTGCGCGACGCACGGGTTCTTCCAGGTGTGCGGGCACG
GCGTGGGCGCGGACCTGGCGCGCGCGGCGCTGGACGGCGCCAGTGACTTCTTCCGGCTGCCGCTGGCGGAGAAGCAGCGC
GCCCGGCGCGTCCCGGGGACCGTGTCCGGGTACACGAGCGCGCACGCCGACCGGTTCGCGTCCAAGCTCCCCTGGAAGGA
GACCCTCTCCTTCGGGTTCCACGACGGCGCCGCGTCGCCCGTCGTCGTCGACTACTTCGCCGGCACCCTCGGGCAGGACT
TCGAGGCAGTGGGGCGGGTGTACCAGAGGTACTGCGAGGAGATGAAGGCTCTGTCGCTGACGATCATGGAGCTCCTGGAG
CTGAGCCTGGGCGTGGAGCGCGGCTACTACCGCGACTTCTTCGAGGACAGCCGCTCCATCATGCGGTGCAACTACTACCC
GCCGTGCCCGGAGCCGGAGCGCACGCTGGGCACGGGCCCGCACTGCGACCCCACCGCGCTGACCATCCTCCTCCAGGACG
ACGTCGGCGGGCTCGAGGTCCTCGTCGACGGCGACTGGCGCCCCGTCCGCCCCGTCCCCGGCGCCATGGTCATCAACATC
GGCGACACCTTCATGGCTCTGTCCAACGGGCGGTACAAGAGCTGCCTGCACCGGGCGGTGGTGAACCAGCGGCAGGAGCG
GCGGTCGCTGGCCTTCTTCCTGTGCCCGCGCGAGGACCGGGTGGTGCGCCCGCCGGCCAGCGGCGCCGTCGGCGAGGCGC
CCCGCCGCTACCCGGACTTCACCTGGGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACCCGCACGCTG
GACGCCTTCACACGCTGGCTCTCCCACGGCCCGGCCCAGGACGCGCCAGTGGCGGCGGCGGCTTCCACCTAG
ATGGTGTCCCAAGCACAGCAAGAGCCAGCTCTGCCTCACAGCAGCAGCACCGCCAAGCGCGCAGCCGCGTCACTCATGGA
CGCCCGCCCGGCCCAGCCTCTCCTCCTCCGCGCCCCGACTCCCAGCATTGACCTCCCCGCGTCCAAGCCGGACAGGGCCG
CCGCGGCGGCCGGCAAGGCCGCCGCCGCCTCCGTGTTCGACCTGCGGCGGGAGCCCAAGATCCCGGCGCCATTCGTGTGG
CCGCACGACGACGCGCGGCCGGCGTCGGCGGCGGAGCTGGACGTGCCGTTGGTGGACGTGGGCGTGCTGCGCAATGGCGA
CCGCGCGGGGCTGCGGCGCGCTGCGGCGCAGGTGGCCGCGGCGTGCGCGACGCACGGGTTCTTCCAGGTGTGCGGGCACG
GCGTGGGCGCGGACCTGGCGCGCGCGGCGCTGGACGGCGCCAGTGACTTCTTCCGGCTGCCGCTGGCGGAGAAGCAGCGC
GCCCGGCGCGTCCCGGGGACCGTGTCCGGGTACACGAGCGCGCACGCCGACCGGTTCGCGTCCAAGCTCCCCTGGAAGGA
GACCCTCTCCTTCGGGTTCCACGACGGCGCCGCGTCGCCCGTCGTCGTCGACTACTTCGCCGGCACCCTCGGGCAGGACT
TCGAGGCAGTGGGGCGGGTGTACCAGAGGTACTGCGAGGAGATGAAGGCTCTGTCGCTGACGATCATGGAGCTCCTGGAG
CTGAGCCTGGGCGTGGAGCGCGGCTACTACCGCGACTTCTTCGAGGACAGCCGCTCCATCATGCGGTGCAACTACTACCC
GCCGTGCCCGGAGCCGGAGCGCACGCTGGGCACGGGCCCGCACTGCGACCCCACCGCGCTGACCATCCTCCTCCAGGACG
ACGTCGGCGGGCTCGAGGTCCTCGTCGACGGCGACTGGCGCCCCGTCCGCCCCGTCCCCGGCGCCATGGTCATCAACATC
GGCGACACCTTCATGGCTCTGTCCAACGGGCGGTACAAGAGCTGCCTGCACCGGGCGGTGGTGAACCAGCGGCAGGAGCG
GCGGTCGCTGGCCTTCTTCCTGTGCCCGCGCGAGGACCGGGTGGTGCGCCCGCCGGCCAGCGGCGCCGTCGGCGAGGCGC
CCCGCCGCTACCCGGACTTCACCTGGGCCGACCTCATGCGCTTCACGCAGCGCCACTACCGCGCCGACACCCGCACGCTG
GACGCCTTCACACGCTGGCTCTCCCACGGCCCGGCCCAGGACGCGCCAGTGGCGGCGGCGGCTTCCACCTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Leersia perrieri | LPERR01G34060 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART01G39570 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI01G36440 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0334700 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0883800 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si012266m.g | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sita_29 | 61.22 | 68.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all Si001573m.g retrocopies