Parental gene:

Solyc01g080210.2

Aliases:None
Description:None
Organism:Tomato (Solanum lycopersicum)
Coordinates:1:79422958..79428832(-)


>Solyc01g080210.2
ATGGGTTCTTTGAAAAATGAAACAGAAAGTTTGTTGCAAGAAGAAGAAGAAGAACCAATCTTGAAAGAACAATCACAAAA
GTACTGCACCTTTCCTATTAGATATCCACAACTTTGGGAAATGTACAAGAAAGCAGTAGCCAGTTTCTGGTCTGTTGAGG
AGGTTGACCTCTCTGAGGATATTCAGCATTGGGAAGCCTTATCTGAATCTGAAAAGCACTTCATCAGTCATGTTTTGGCA
TTTTTTGCCGCATCAGATGGAATTGTTTTGGAAAATTTGGCTGCTAGATTTCTGAACGATGTGCAAATTCAAGAGGCACG
CGCATTTTATGGTTTTCAAATTGCAATGGAAAATATTCACTCGGAGATGTACAGCTTGCTTCTGGACGCTTTTATCAAGG
ACCCAAGGCAGAAAAATAAACTTTTTAATGCAATTGACAGCATTCCTTGTGTCTCACAAAAGGCCAAGTGGGCTTTGAAT
TGGATACAGAGTTCCAGCTCATTTGCTGAGAGGCTTGTAGCTTTTGCATGTGTTGAAGGAATTTTCTTTTCAGGAAGCTT
TTGTGCTATCTTTTGGCTGAAAAAGAGAGGGTTGATGCCAGGATTGGCTTACTCAAATGTGCTCATTTCTAAGGATGAGG
GTCTCCACCGTGACTTTGCTTGCCTTCTATATAGTATTATGCGAAATCAATTGACTAGGCAAAAGGTTCATCAAATTGTG
CATGAAGCGGTTGAAATTGAAACTGAATTTGTCTGTGATGCCCTTCCCTGTGCATTGATTGGCATGAATGCAGAACTAAT
GAGTCAGTACATAAAGTTTGTTGCTGATCACCTCCTGGTTGCCTTAGGGTACGACAAGAAGTATAATGTTGGAAACCCTT
TTGATTGGATGGAATTTATTTCTCTTCAGGGCAAATCCAACTTCTTTGAGAGAAGAGTTGCTGACTATCAGAAGGCTTCT
GTGATGTCAAGCTTGCAAGACAATGGCAAGAATTTTGAGTTCAAACTGGATGAAGACTTCTAG

Species Parental gene accession Homology type Retrogenes number
Amborella trichopoda AMTR_s00025p00110680 ortholog_one2one 1 retrogene
retro_atri_2,
Brassica rapa Bra014962 ortholog_one2one 1 retrogene
retro_brap_7,
Prunus persica PRUPE_ppa008063mg ortholog_one2one 1 retrogene
retro_pper_7,
Theobroma cacao TCM_020494 ortholog_one2one 1 retrogene
retro_tcac_4,
Vitis vinifera VIT_05s0020g02560 ortholog_one2many 1 retrogene
retro_vvin_20,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_slyc_6 74.07 95.29
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Download FASTA sequences of all Solyc01g080210.2 retrocopies