RetrogeneDB ID: | retro_amel_1293 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193160.1:759418..759676(-) | ||
Located in intron of: | ENSAMEG00000017628 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSAMEG00000000882 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] |
Percent Identity: | 77.01 % |
Parental protein coverage: | 93.55 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | RGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRKEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQ |
RGQ.QKVQKVMV..I.LIFR.LQNR..IQVWL..Q.NMR.EGCI..FDEY.NLVLDDA.EIH.KTKSRKQ | |
Retrocopy | RGQDQKVQKVMVHTIILIFRSLQNRFQIQVWLHNQANMRIEGCIHSFDEYVNLVLDDAKEIHYKTKSRKQ |
Parental | LAGRIMLKGDNITLLQS |
L.G.IMLKGDN.TLLQ. | |
Retrocopy | L-GQIMLKGDNTTLLQT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |