RetrogeneDB ID: | retro_amel_53 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192969.1:857599..858172(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000019658 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PPP1R2 | ||
Ensembl ID: | ENSAMEG00000009410 | ||
Aliases: | None | ||
Description: | protein phosphatase 1, regulatory (inhibitor) subunit 2 [Source:HGNC Symbol;Acc:9288] |
Percent Identity: | 57.14 % |
Parental protein coverage: | 85.37 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | ASTASHRPIKGILKNKSSTTSSVVASAEQPGRSVDEELSKKSQKWDEMNILATYHPADKDYGLMKIDEPS |
A.TASHRPIKGILKNKSST.S....SA.Q.G....E...KKSQ.WDE.NILAT...A..DY.LMK..EPS | |
Retrocopy | AXTASHRPIKGILKNKSSTASLAASSAQQSGGTIQEVQRKKSQRWDESNILATRRLAYRDYDLMKMNEPS |
Parental | TPYHSMVGDDEDALSDSEATEALTPDILAKKLAAAEGSEPKYRVHEQASSEDEDSDLSPEEQEKKRQFEM |
.PY.S...D.ED...D.EA.EA.TPDILAKK.AA....E......E..S.....S......QEK.RQFEM | |
Retrocopy | SPYFSPQDDGEDPVNDFEAKEAMTPDILAKKFAASSTAELNCQLGEPESDGVHSSKILLDKQEKQRQFEM |
Parental | KRKLHYNEGLNIKLARQLISKDLHDDEEDEEMSET |
KRKLHY.EGLN.KLARQLIS.DL..........ET | |
Retrocopy | KRKLHYTEGLNLKLARQLISEDLQKQKDKDDNEET |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |