RetrogeneDB ID: | retro_amel_964 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192773.1:763554..764011(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SPAG7 | ||
Ensembl ID: | ENSAMEG00000006299 | ||
Aliases: | None | ||
Description: | sperm associated antigen 7 [Source:HGNC Symbol;Acc:11216] |
Percent Identity: | 83.01 % |
Parental protein coverage: | 66.96 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | IERSILHDVVEVAGLTSFSFGE-DDECRYVMIFKKEFAPSDEELDSYRRGEEWDPQKAEEKRKLKELAQQ |
IER.ILH..VEVAGLTSFSFG...DEC..VMIFKK.FAPSDE.LDSYRRGEEWD.QK.EEK.KLKELAQ. | |
Retrocopy | IERNILHNMVEVAGLTSFSFGK>NDECHDVMIFKKKFAPSDEKLDSYRRGEEWDLQKVEEKQKLKELAQR |
Parental | QEEAAAQQGPVVVSPASDYKDKYSHLIGKGAAKDAAHMLQANKTYGCVPVANKRDTRSIEEAMNEIRAKK |
QE..AAQQGPVVVSPAS.YKDKYSHLIGKG.AKD.AHMLQANKTY.CVP.ANKRD.RSIEEAMNEIR.KK | |
Retrocopy | QEKEAAQQGPVVVSPASNYKDKYSHLIGKGEAKDVAHMLQANKTYSCVPMANKRDPRSIEEAMNEIRVKK |
Parental | RLRQSGEECPPTS |
.L.QSGEE.PPTS | |
Retrocopy | CLWQSGEELPPTS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000006299 | 1 retrocopy |
retro_amel_964 ,
|
Canis familiaris | ENSCAFG00000015761 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000011669 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000020098 | 1 retrocopy | |
Felis catus | ENSFCAG00000030469 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000007933 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000014031 | 1 retrocopy | |
Mus musculus | ENSMUSG00000018287 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000001108 | 1 retrocopy |