RetrogeneDB ID: | retro_chof_1163 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_21596:7994..8263(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000002184 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 54.95 % |
Parental protein coverage: | 60.4 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LGEIHSRLLDHRPVIQGEIRYFVKEFEEKR-GLREMRVLENLKNMIHKTNEQTLPKCGETVQDNLNQILQ |
LG.I.S.LLDHRP..QGE..YFVK...E...GL.EMRVLENLK..IHKTN.Q..PK.GE.V.DN..QILQ | |
Retrocopy | LGTIYSKLLDHRPDTQGETHYFVKNVKEYL<GLQEMRVLENLKSVIHKTNDQIFPK*GEMVKDNIKQILQ |
Parental | RXXXXXXXVCRLQQREQEQRK |
.........C........QRK | |
Retrocopy | GLQSVDSVDCSHSVCRLQQRK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000002184 | 4 retrocopies | |
Callithrix jacchus | ENSCJAG00000021322 | 2 retrocopies | |
Microcebus murinus | ENSMICG00000005966 | 1 retrocopy |