RetrogeneDB ID: | retro_chof_1986 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_444063:635..887(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000004876 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.92 % |
Parental protein coverage: | 54.04 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | PGDRERRRTGDLRLGERDLLLIRGGDLRHMGGGGSILLGGLKRRGGGRGQGASTAVAVI--SWPSICPPP |
PGD.ER.RTG....G....LLIRGGDL.HMGGGGSILLGGL...GG..........AV...SWP.IC.PP | |
Retrocopy | PGDQERQRTGACAWG----LLIRGGDLCHMGGGGSILLGGLNGLGGWPRXXXXXSTAVATSSWPAIC-PP |
Parental | SMCFSAFSASSGFSNSTYA |
..CFSAFSASSGFS.ST.A | |
Retrocopy | ILCFSAFSASSGFSISTQA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000004876 | 3 retrocopies |
retro_chof_1586, retro_chof_1986 , retro_chof_2273,
|
Homo sapiens | ENSG00000167970 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000008219 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000009975 | 1 retrocopy |