RetrogeneDB ID: | retro_chof_2273 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_62518:4396..4686(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000004876 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 54.9 % |
Parental protein coverage: | 62.73 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LLREELELERLRWRRRPGDRERRRTGDLRLGERDLLLIRGGDLRHMGGGGSILLGGLKRRGGG-RGQGAS |
LL..ELE...L.W...P.D.....TG.L..GE........GDL..MGGGG.ILLGGL...GGG...QGAS | |
Retrocopy | LLYHELEGQELLWQQ*PEDQGGHCTGYLHPGEK--IFSSMGDLSYMGGGGCILLGGLNCLGGG<LMQGAS |
Parental | TAVAVISWPSICPPPSMCFSAFSASSGFSNST |
T.VA.I.WPSIC.P.SMCFS..S.SS.FS..T | |
Retrocopy | TPVAAIPWPSIC-PLSMCFSTLS-SSIFSKTT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000004876 | 3 retrocopies |
retro_chof_1586, retro_chof_1986, retro_chof_2273 ,
|
Homo sapiens | ENSG00000167970 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000008219 | 1 retrocopy | |
Vicugna pacos | ENSVPAG00000009975 | 1 retrocopy |