RetrogeneDB ID: | retro_chof_2004 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_45069:4525..4773(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSCHOG00000000685 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.14 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MASATRFIQRLRNWASGQDLQA-KLQLRYQEISKRTQPPPKLPVGPSHKLSNNYYCTRDGRREAVPPSVI |
MASATRFIQ.L.N.AS.QDLQ..KLQ..Y.EISK.TQPPPKL.VGPSHKLSNNYYCTRDG.REAVPPSVI | |
Retrocopy | MASATRFIQGLQNCASKQDLQG<KLQMCY*EISKQTQPPPKLLVGPSHKLSNNYYCTRDGHREAVPPSVI |
Parental | MSSQKALASGKPAE |
MSSQKAL.SG..AE | |
Retrocopy | MSSQKALVSGNAAE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Choloepus hoffmanni | ENSCHOG00000000685 | 1 retrocopy |
retro_chof_2004 ,
|
Callithrix jacchus | ENSCJAG00000010709 | 2 retrocopies | |
Dipodomys ordii | ENSDORG00000012324 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000015637 | 3 retrocopies | |
Rattus norvegicus | ENSRNOG00000006939 | 2 retrocopies |