RetrogeneDB ID: | retro_drer_37 | ||
Retrocopylocation | Organism: | Zebrafish (Danio rerio) | |
Coordinates: | Zv9_scaffold3515:238157..238324(-) | ||
Located in intron of: | ENSDARG00000063035 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CABZ01062563.1 | ||
Ensembl ID: | ENSDARG00000086035 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 55. % |
Parental protein coverage: | 57.84 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | HPSIHPSIHAILLPSVCLLFHPSIHPSIHPSIH-PSIHPFIHPSIYPSIPHFVYCSIHPS |
.P.IHPSIHA....S..L.....IHPSIHPSIH.P.IHPFI...IY..I..F.....HPS | |
Retrocopy | YPPIHPSIHASIHSSIQLSINLFIHPSIHPSIH<PVIHPFISHFIY*FIHPFIF---HPS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Danio rerio | ENSDARG00000086035 | 3 retrocopies |
retro_drer_25, retro_drer_34, retro_drer_37 ,
|
Danio rerio | ENSDARG00000090390 | 1 retrocopy | |
Ficedula albicollis | ENSFALG00000013753 | 1 retrocopy |