RetrogeneDB ID: | retro_etel_1135 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_216340:12785..13382(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000016024 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.77 % |
Parental protein coverage: | 73.98 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | LCVVTLTL-VTWSSLLMASLRSQAPGMEHYVSGIQRK-GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD |
LCVVTLTL.VTWSSL.MAS.RSQAPGMEH..SGI....GTTTRR.VG.TKDVLSVAFSSDNRQIVSGSRD | |
Retrocopy | LCVVTLTL*VTWSSLPMASMRSQAPGMEHSISGISQR<GTTTRRCVGQTKDVLSVAFSSDNRQIVSGSRD |
Parental | KTIKLWNTLGVCKYTVQ-DESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKV-WNLANCKLKTNHIGHTGY |
KTIKLWNTLGVC.YT....ESHS.WVS.VRFSP.SSNP...S.GWD.LVKV..NLANCKLKTN.I.HTG. | |
Retrocopy | KTIKLWNTLGVCTYTIR<EESHSAWVSRVRFSPSSSNPATTSHGWDTLVKV<VNLANCKLKTNYISHTGS |
Parental | LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIK |
LNTVT.SP.G.L.ASGGKDGQAMLW.LNEGKHLYTLDGGDIINALCFSPN.YWLC.AT.PSIK | |
Retrocopy | LNTVTLSPHGLL*ASGGKDGQAMLWALNEGKHLYTLDGGDIINALCFSPNHYWLCTATSPSIK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |