RetrogeneDB ID: | retro_etel_452 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_7505:88370..88738(-) | ||
Located in intron of: | ENSETEG00000018705 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | OAZ1 | ||
Ensembl ID: | ENSETEG00000017945 | ||
Aliases: | None | ||
Description: | ornithine decarboxylase antizyme 1 [Source:HGNC Symbol;Acc:8095] |
Percent Identity: | 64.52 % |
Parental protein coverage: | 53.98 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | SRLPLNCCSNLGPGPRWC-DAPHPPLKIPGGRG-DSQRDHNLSAKLFYSDNRLTVTEELASNDKTRILNV |
SR.PL.CCSNL..G.R...DAPHPP.KI.G..G.DS.R..NLSAKLFYSD..LTV.EEL.SNDKTRILN. | |
Retrocopy | SRFPLHCCSNLVQGLRGVPDAPHPPTKISGRQG<DS*RGRNLSAKLFYSDHQLTVPEELVSNDKTRILNI |
Parental | QSRLTESKHVTWRAVLSGGSLYIEMPGGALPEGSKDSLAVLLEFAEEQLRVDHV |
.SRLTE.K........SG..LY.EMPGG.LPEGSK.SLAV...F...QL.V.HV | |
Retrocopy | *SRLTEAKLGRGLC*VSGSRLYTEMPGGVLPEGSKGSLAVFPKFTKKQLCVYHV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000016529 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000017945 | 2 retrocopies |
retro_etel_2073, retro_etel_452 ,
|
Myotis lucifugus | ENSMLUG00000004446 | 2 retrocopies | |
Mus musculus | ENSMUSG00000035242 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000002179 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000009345 | 1 retrocopy |