RetrogeneDB ID: | retro_mluc_2157 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430065:316640..317279(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | OAZ1 | ||
Ensembl ID: | ENSMLUG00000004446 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.11 % |
Parental protein coverage: | 96.02 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 6 |
Parental | VKSSLQRILNSHCFAREKEGNKPSVTVHPSRTMPLISLHSRGGRSS-ESSRVSLNCCSNLGPGPQWCD-V |
..SSLQR.LNSHCF.RE.EG.KPS.T.H.SRTM...S.H.RG..SS..SSRVSLNC.S.LG.G......V | |
Retrocopy | MESSLQRTLNSHCFTRETEGSKPSATGHASRTMAHQSAHPRG-HSS<QSSRVSLNC-SSLGLGLRGAPHV |
Parental | PHPPLKIPGGRGNSQRDHNLSANLFYSDNRLNVTEELTSNNKTRILNVQTRLTDAKHINWRAVLSSSCLY |
PHPPLKIPGGRGNS.RD.NLSANLFYSDNRLNVTEELTSNNKTRILNVQT.LTDAKH.NWRAVLSSSCL. | |
Retrocopy | PHPPLKIPGGRGNSRRDPNLSANLFYSDNRLNVTEELTSNNKTRILNVQTWLTDAKHGNWRAVLSSSCLC |
Parental | IEIPGGALPEGSKDSFAV-LLEFAEEQLHADHVFICFHKN-RDDRAALLRTFSFMGFEIVRP-GHPLVP- |
IEIPG.ALP.G..DS..V.LLEFAEEQLHA.HVFIC.H...RD.RAALLR..SFMG.E..RP.G.PL.P. | |
Retrocopy | IEIPGRALPWGA-DSSQV<LLEFAEEQLHAGHVFICLHSS<RDGRAALLRPCSFMGSETLRP<GQPLPP< |
Parental | KRPDACFMA-YTFE |
KRPD.CF.A..TFE | |
Retrocopy | KRPDTCFTA<HTFE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dipodomys ordii | ENSDORG00000016529 | 2 retrocopies | |
Echinops telfairi | ENSETEG00000017945 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000004446 | 2 retrocopies |
retro_mluc_1524, retro_mluc_2157 ,
|
Myotis lucifugus | ENSMLUG00000022795 | 2 retrocopies | |
Mus musculus | ENSMUSG00000035242 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000002179 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000009345 | 1 retrocopy |