RetrogeneDB ID: | retro_etel_573 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_9115:12945..13474(-) | ||
Located in intron of: | ENSETEG00000020232 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ANXA1 | ||
Ensembl ID: | ENSETEG00000018299 | ||
Aliases: | None | ||
Description: | annexin A1 [Source:HGNC Symbol;Acc:533] |
Percent Identity: | 71.19 % |
Parental protein coverage: | 61.32 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | FIENEEPEYIKTVKGSKGGPGSAVSPYPAFNPASDVAALHKAITVKGVDEATIIDILTKRTNAQRQQIKA |
F.E.E..E..KTV.GSK.GPGSAVSPYP..NP.S..AAL.KA.T.KG.D..TI.DIL.KRT.AQR..IKA | |
Retrocopy | FVETEKQEDVKTVTGSKVGPGSAVSPYPPCNPTSGAAALPKAVTGKGGDDGTITDILPKRTDAQRRHIKA |
Parental | AYLQEKGKPLDEALKKAFTGHLEEVALALLKTPAQFDADE-LRAAMKGLGTDEDTLIEILASRTNREIRD |
A.L.EKG.PLDEA.KKAFTGHL.EVALAL..TPAQFDADE.LR.AMKGLGTDE.TLIE..ASRT.REIRD | |
Retrocopy | ADLREKGNPLDEAGKKAFTGHLQEVALALGETPAQFDADE>LRVAMKGLGTDEGTLIEMVASRTDREIRD |
Parental | INRVYRDELKRDLAKDITSDTSGDFQKALLSLAKGDR |
INRVYRDEL.R.LA.DI.SDTS..F.......A.GDR | |
Retrocopy | INRVYRDELTRGLAEDIPSDTSVVFPRLCFLSARGDR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000015978 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000002187 | 3 retrocopies | |
Echinops telfairi | ENSETEG00000018299 | 1 retrocopy |
retro_etel_573 ,
|
Otolemur garnettii | ENSOGAG00000009311 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000006489 | 2 retrocopies |