RetrogeneDB ID: | retro_etel_791 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_164646:1384..1909(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LYPLA1 | ||
Ensembl ID: | ENSETEG00000001727 | ||
Aliases: | None | ||
Description: | lysophospholipase I [Source:HGNC Symbol;Acc:6737] |
Percent Identity: | 89.39 % |
Parental protein coverage: | 98.32 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | HGWAEAFAGIRSSHIKYICPHAPLMPVTLNMNMTMPSWFDIIGLSPDAQE-DEHGIKQAAENLKALIDQE |
HG.AEAFAGIRSSHIKYICPHAPLMPVTLNM.MTMPSW...I.LSPDAQE.DEHGIKQA.ENLKALIDQE | |
Retrocopy | HGRAEAFAGIRSSHIKYICPHAPLMPVTLNMYMTMPSWV*YIELSPDAQE<DEHGIKQATENLKALIDQE |
Parental | VKNGIPSNRIILGGFSHGGALSLYTALTTQQKLAGIIGLSCWLPLRASFPQGPISG-ANKEISILQCHGD |
VKNGIPSNRIILGGFS.GGALSLYTALTTQQKLAGI.GLSCWLPL.ASFPQGPISG..N.EISILQCHGD | |
Retrocopy | VKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGITGLSCWLPLQASFPQGPISG<SNNEISILQCHGD |
Parental | CDPLVPLRF-GSLTAEKLKTLVNTANVTFKTYEGMMHSS |
CDPLVPLR..GSLT.EKLKTLVNTANVTFKTYEGMM.S. | |
Retrocopy | CDPLVPLRL<GSLTGEKLKTLVNTANVTFKTYEGMMKSA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |