RetrogeneDB ID: | retro_etel_932 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_185865:1447..1765(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CBX1 | ||
Ensembl ID: | ENSETEG00000000203 | ||
Aliases: | None | ||
Description: | chromobox homolog 1 [Source:HGNC Symbol;Acc:1551] |
Percent Identity: | 72.07 % |
Parental protein coverage: | 60. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | IAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELM |
I..FL.SQK...E.D...G.KRK..SDSE.....SK.KKK.....KPRGFARGL.PERIIGATDSSGELM | |
Retrocopy | IEAFLNSQKAGKEKD---GTKRKSLSDSES--DDSKSKKKRDAADKPRGFARGLDPERIIGATDSSGELM |
Parental | FLMKWKNSDEADLVPAKEANVKCPQVVISFYEERLTWHSYP |
FLMKWK.SDEADLV.AKEAN.KCPQ.VI.FYEERLTWHS.P | |
Retrocopy | FLMKWKDSDEADLVLAKEANMKCPQIVIAFYEERLTWHSCP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |