RetrogeneDB ID: | retro_etel_944 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_189137:1126..1468(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FAM204A | ||
Ensembl ID: | ENSETEG00000003855 | ||
Aliases: | None | ||
Description: | family with sequence similarity 204, member A [Source:HGNC Symbol;Acc:25794] |
Percent Identity: | 56.2 % |
Parental protein coverage: | 61.83 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 5 |
Parental | EAEANISAREECPSGISLNMWNKFQ-ELQKKHTEQKTATSRFRRKR-GRRPRK-GKLKNEEASQ-SEQ-F |
..........E..SG.SL.MWNKF...L...HTEQKTA.SR.RRKR.G..P.K.GKLKNEEASQ.SEQ.. | |
Retrocopy | QSQRQTDVHKEFHSGTSLKMWNKFPIALPRNHTEQKTALSRVRRKR<GNAPKK<GKLKNEEASQ<SEQ<I |
Parental | PNEKQWKELTQYFGANDRFDPPVKKKTVDKSGL-EKRIDQAVEACDIEKAE |
P.E.QW.E.TQYFG.ND.FD.PV.K..V.K.G..EK.I..A......EKAE | |
Retrocopy | PSESQWRERTQYFGVNDSFDVPV-KENVGKAGA>EKSIARAEPEWGVEKAE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |