RetrogeneDB ID: | retro_ggor_64 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 2b:68962454..68963006(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSGGOG00000023151 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FTH1 | ||
Ensembl ID: | ENSGGOG00000027722 | ||
Aliases: | None | ||
Description: | ferritin, heavy polypeptide 1 [Source:HGNC Symbol;Acc:3976] |
Percent Identity: | 98.91 % |
Parental protein coverage: | 97.34 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MTTASTSQVRQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKL |
MTTASTSQVRQNYHQDSEAAIN.QINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKL | |
Retrocopy | MTTASTSQVRQNYHQDSEAAINSQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKL |
Parental | MKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLN |
MKLQNQ.GGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLN | |
Retrocopy | MKLQNQQGGRIFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLN |
Parental | EQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLGDSDNES |
EQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLGDSDNES | |
Retrocopy | EQVKAIKELGDHVTNLRKMGAPESGLAEYLFDKHTLGDSDNES |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .67 RPM | 580 .48 RPM |
SRP007412_cerebellum | 0 .12 RPM | 282 .76 RPM |
SRP007412_heart | 0 .28 RPM | 266 .20 RPM |
SRP007412_kidney | 0 .57 RPM | 1457 .48 RPM |
SRP007412_liver | 0 .66 RPM | 854 .86 RPM |
SRP007412_testis | 0 .10 RPM | 517 .17 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_2351 |