RetrogeneDB ID: | retro_pcap_383 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_62797:6935..7363(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FTH1 | ||
Ensembl ID: | ENSPCAG00000010377 | ||
Aliases: | None | ||
Description: | ferritin, heavy polypeptide 1 [Source:HGNC Symbol;Acc:3976] |
Percent Identity: | 60.42 % |
Parental protein coverage: | 78.57 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | AINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLNDIKKP |
A.NRQ...ELYAS.VYLS.S.YFD.DDV.LK.FA.YFLHQS..E.EHAEKL.KLQ.Q.GG.IF..D.KKP | |
Retrocopy | ATNRQVTPELYASCVYLSTSHYFDSDDVPLKYFASYFLHQSQKEQEHAEKLRKLQEQ*GGQIFPEDLKKP |
Parental | DRDDWESGLNAME-CALFLEKNVNQSLLDLHKLATEKNDPHLCDFIETHYLDEQVKSIKQLGDYVTNLRK |
...D.E.G..A.......LE...NQ.LL.LHKLAT..NDP.LCDF.ETH...EQ.KSI..LGD.VT.... | |
Retrocopy | THNDQETGEKAAQ<VCSHLENTMNQLLLELHKLATDWNDPNLCDFDETHHQNEQAKSIEELGDCVTDSHE |
Parental | MGAP |
.G.P | |
Retrocopy | IGGP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |