RetrogeneDB ID: | retro_lafr_943 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_5:84687471..84687788(-) | ||
Located in intron of: | ENSLAFG00000013504 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RBX1 | ||
Ensembl ID: | ENSLAFG00000008795 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 79.44 % |
Parental protein coverage: | 98.15 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAW-DIVVDNCAICRNHIMDLCIECQANQASATSEECT |
M.AA.D.DT.S.TNS.AG...FEVKKWNAVAL.AW.D.VVDNCAICR.HIMD.CIE.QANQASATSEECT | |
Retrocopy | MVAAIDMDTLSCTNSSAGEEHFEVKKWNAVALCAW<DVVVDNCAICRDHIMDHCIEGQANQASATSEECT |
Parental | VAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQNY |
.AWG..NHAFH.HCIS.WLKTRQVCPLDNRE.EFQ.Y | |
Retrocopy | IAWGLSNHAFHSHCISCWLKTRQVCPLDNRE*EFQKY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |