Parental gene:

RBX1, ENSDNOG00000007595

Aliases:None
Description:ring-box 1, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:9928]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1114:4078..59536(+)


>ENSDNOG00000007595
ATGGCGGCAGCGATGGATGTGGATACCCCGAGCGGCACTAACAGCGGCGCGGGCAAGAGGCGCTTTGAAGTGAAAAAGTG
GAATGCAGTTCTCTGGTGGAATGCTGATTGTATCTGCAGAAACCACATTATGGATCTTCGCATAGAGTGTCAAGCTAACC
AGGCCTCAGCTACTTCTGAGGAGTGCACCGTGGCATGGGGAGTCTGTAATCATGCTTTTCACTTCCACTGCATCTCTCGC
TGGCTCAAAACACGGCAGGTGTGTCCATTGGACAACAGAGAGTGGGAATTCCAAAAGTATGGGCACTAG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 35 .78 RPM
SRP012922_cerebellum 68 .73 RPM
SRP012922_heart 35 .73 RPM
SRP012922_kidney 81 .59 RPM
SRP012922_liver 25 .39 RPM
SRP012922_lung 75 .14 RPM
SRP012922_quadricep_muscle 32 .37 RPM
SRP012922_spleen 53 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000030225 ortholog_one2many 2 retrogenes
retro_btau_1415, retro_btau_61,
Callithrix jacchus ENSCJAG00000004763 ortholog_one2one 3 retrogenes
retro_cjac_1267, retro_cjac_1955, retro_cjac_1962,
Dasypus novemcinctus ENSDNOG00000005961 within_species_paralog 3 retrogenes
retro_dnov_1587, retro_dnov_2383, retro_dnov_294,
Homo sapiens ENSG00000100387 ortholog_one2one 1 retrogene
retro_hsap_2118,
Loxodonta africana ENSLAFG00000008795 ortholog_one2one 1 retrogene
retro_lafr_943,
Microcebus murinus ENSMICG00000008019 ortholog_one2one 1 retrogene
retro_mmur_750,
Myotis lucifugus ENSMLUG00000007815 ortholog_one2many 4 retrogenes
retro_mluc_1259, retro_mluc_1712, retro_mluc_20, retro_mluc_244,
Macaca mulatta ENSMMUG00000012642 ortholog_one2one 3 retrogenes
retro_mmul_702, retro_mmul_974, retro_mmul_996,
Monodelphis domestica ENSMODG00000013054 ortholog_one2one 1 retrogene
retro_mdom_626,
Mus musculus ENSMUSG00000022400 ortholog_one2one 1 retrogene
retro_mmus_1633,
Nomascus leucogenys ENSNLEG00000015436 ortholog_one2one 1 retrogene
retro_nleu_1956,
Ochotona princeps ENSOPRG00000006728 ortholog_one2one 2 retrogenes
retro_opri_410, retro_opri_649,
Pongo abelii ENSPPYG00000011861 ortholog_one2one 2 retrogenes
retro_pabe_1986, retro_pabe_1987,
Pan troglodytes ENSPTRG00000014417 ortholog_one2one 1 retrogene
retro_ptro_1550,
Rattus norvegicus ENSRNOG00000019214 ortholog_one2one 2 retrogenes
retro_rnor_1890, retro_rnor_2724,
Ictidomys tridecemlineatus ENSSTOG00000015580 ortholog_one2many 1 retrogene
retro_itri_888,
Tupaia belangeri ENSTBEG00000009043 ortholog_one2one 4 retrogenes
retro_tbel_1175, retro_tbel_3306, retro_tbel_3756, retro_tbel_3805,
Tursiops truncatus ENSTTRG00000012018 ortholog_one2one 2 retrogenes
retro_ttru_1419, retro_ttru_583,
Vicugna pacos ENSVPAG00000004894 ortholog_one2one 2 retrogenes
retro_vpac_207, retro_vpac_502,
Drosophila melanogaster FBgn0025638 ortholog_one2many 1 retrogene
retro_dmel_55,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_433 80.52 74.51
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Download FASTA sequences of all ENSDNOG00000007595 retrocopies