RetrogeneDB ID: | retro_meug_1251 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold34092:13137..13579(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RNF141 | ||
Ensembl ID: | ENSMEUG00000014558 | ||
Aliases: | None | ||
Description: | ring finger protein 141 [Source:HGNC Symbol;Acc:21159] |
Percent Identity: | 79.73 % |
Parental protein coverage: | 63.64 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | INKSSGIVEASRIMNLYQFIQLYKDITSQAAGVLAQDPTTSEGAAESLSSVSSCQASIWMGRVKQLTDEE |
INKSSGI.EASRIMNL..FIQLYKDITSQ.A.VL.QDPTTSEG.AESLSS.SSCQA.IWMGRV.QLTDEE | |
Retrocopy | INKSSGIAEASRIMNLCKFIQLYKDITSQEAQVLVQDPTTSEGTAESLSSASSCQANIWMGRVRQLTDEE |
Parental | E-CCICMDGRADLILPCTHSFCQKCIDKWSDRHRNCPICRLQMSGVNDSWVVSDAPTEDDMANYILNMAD |
E..CICM...A.LILP..HSFC.KCIDKWSD.HRNCPIC.LQMSGV.DSWV..DA.TEDDM.NYI.NMAD | |
Retrocopy | E>SCICMNE*AYLILPFAHSFCRKCIDKWSDGHRNCPICLLQMSGVKDSWVLPDASTEDDMVNYINNMAD |
Parental | EAGQPHMP |
.AGQ.H.P | |
Retrocopy | GAGQSHIP |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000011014 | 1 retrocopy | |
Cavia porcellus | ENSCPOG00000007808 | 2 retrocopies | |
Macropus eugenii | ENSMEUG00000014558 | 1 retrocopy |
retro_meug_1251 ,
|
Mus musculus | ENSMUSG00000030788 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000002807 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000001765 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000002101 | 2 retrocopies | |
Ictidomys tridecemlineatus | ENSSTOG00000019740 | 1 retrocopy |