RetrogeneDB ID: | retro_meug_1381 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold385497:410..695(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMEUG00000014912 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.42 % |
Parental protein coverage: | 89.52 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | KKCGKHQPHQVTQYKKGKDSLYAQGKRRYDLKQSDYGGQTKPIFQ-KKAKTTKKIVLRLERVEPNCRSKR |
KKCGKHQPH.V.QYKK.K.SL..Q.K.....KQS.YGGQTK..FQ....KTTKKIVLRLE.VE.N..SKR | |
Retrocopy | KKCGKHQPHKVMQYKKVKGSLHTQEKS*HNEKQSAYGGQTKSNFQXXXXKTTKKIVLRLEYVELN*LSKR |
Parental | MLAIKRRKHFELGGDKKRKGQVIQF |
MLAIK..K.FE..G.KKRK.QVIQF | |
Retrocopy | MLAIKKCKYFEPEGNKKRKIQVIQF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Anolis carolinensis | ENSACAG00000008503 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000014912 | 6 retrocopies |
retro_meug_1056, retro_meug_1381 , retro_meug_1610, retro_meug_1979, retro_meug_2185, retro_meug_489,
|
Monodelphis domestica | ENSMODG00000025578 | 2 retrocopies | |
Sarcophilus harrisii | ENSSHAG00000013479 | 1 retrocopy |