RetrogeneDB ID: | retro_acar_98 | ||
Retrocopylocation | Organism: | Anole lizard (Anolis carolinensis) | |
Coordinates: | 3:102557556..102557770(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSACAG00000008503 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.83 % |
Parental protein coverage: | 66.98 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KVTQY-KKGKESLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKH |
KVTQ..KKGKE.LYAQGK..Y..KQS.YG.QTKPIF.KK..T..KI.LRLE.VEPNC.SK..LAIK.CKH | |
Retrocopy | KVTQK>KKGKEYLYAQGKHQYGYKQSRYGSQTKPIFCKKVRTMMKIALRLEYVEPNCLSKGTLAIKWCKH |
Parental | FE |
F. | |
Retrocopy | FK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP009831_adrenal | 0 .00 RPM | 0 .00 RPM |
SRP009831_brain | 0 .00 RPM | 0 .00 RPM |
SRP009831_dewlap | 0 .00 RPM | 0 .00 RPM |
SRP009831_embryo | 0 .00 RPM | 0 .00 RPM |
SRP009831_heart | 0 .00 RPM | 0 .00 RPM |
SRP009831_liver | 0 .00 RPM | 0 .00 RPM |
SRP009831_lung | 0 .00 RPM | 0 .00 RPM |
SRP009831_ovary | 0 .00 RPM | 0 .00 RPM |
SRP009831_skeletal_muscle | 0 .00 RPM | 0 .00 RPM |